Protein–RNA interactions for Protein: Q810W6

Cxcr1, C-X-C chemokine receptor type 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr1Q810W6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cxcr1Q810W6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Cxcr1Q810W6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cxcr1Q810W6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.3■■□□□ 1
Cxcr1Q810W6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cxcr1Q810W6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cxcr1Q810W6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cxcr1Q810W6 Cap2-205ENSMUST00000225824 1634 ntBASIC21.29■■□□□ 1
Cxcr1Q810W6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cxcr1Q810W6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcr1Q810W6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcr1Q810W6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.29■■□□□ 1
Cxcr1Q810W6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcr1Q810W6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcr1Q810W6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Cxcr1Q810W6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cxcr1Q810W6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cxcr1Q810W6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.28■■□□□ 1
Cxcr1Q810W6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Cxcr1Q810W6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.27■■□□□ 1
Cxcr1Q810W6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.27■■□□□ 1
Cxcr1Q810W6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Cxcr1Q810W6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Cxcr1Q810W6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Cxcr1Q810W6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.25■□□□□ 0.99
Cxcr1Q810W6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cxcr1Q810W6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cxcr1Q810W6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cxcr1Q810W6 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cxcr1Q810W6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cxcr1Q810W6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cxcr1Q810W6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Gm27502-201ENSMUST00000183495 199 ntBASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cxcr1Q810W6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.22■□□□□ 0.99
Cxcr1Q810W6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cxcr1Q810W6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cxcr1Q810W6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cxcr1Q810W6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.2■□□□□ 0.98
Cxcr1Q810W6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cxcr1Q810W6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cxcr1Q810W6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
Cxcr1Q810W6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cxcr1Q810W6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cxcr1Q810W6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cxcr1Q810W6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cxcr1Q810W6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.17■□□□□ 0.98
Cxcr1Q810W6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cxcr1Q810W6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cxcr1Q810W6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cxcr1Q810W6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms