Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim50Q810I2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.16■□□□□ 0.98
Trim50Q810I2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim50Q810I2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim50Q810I2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim50Q810I2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim50Q810I2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim50Q810I2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.15■□□□□ 0.98
Trim50Q810I2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim50Q810I2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim50Q810I2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim50Q810I2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Trim50Q810I2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim50Q810I2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim50Q810I2 Cap2-205ENSMUST00000225824 1634 ntBASIC21.14■□□□□ 0.97
Trim50Q810I2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trim50Q810I2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim50Q810I2 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.13■□□□□ 0.97
Trim50Q810I2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim50Q810I2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim50Q810I2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Trim50Q810I2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim50Q810I2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim50Q810I2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim50Q810I2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Trim50Q810I2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim50Q810I2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim50Q810I2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Trim50Q810I2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim50Q810I2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.11■□□□□ 0.97
Trim50Q810I2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim50Q810I2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim50Q810I2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim50Q810I2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim50Q810I2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim50Q810I2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Trim50Q810I2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim50Q810I2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim50Q810I2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim50Q810I2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim50Q810I2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim50Q810I2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Trim50Q810I2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim50Q810I2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Trim50Q810I2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim50Q810I2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim50Q810I2 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim50Q810I2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim50Q810I2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim50Q810I2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trim50Q810I2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Trim50Q810I2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
Trim50Q810I2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Trim50Q810I2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim50Q810I2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim50Q810I2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim50Q810I2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim50Q810I2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim50Q810I2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim50Q810I2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Trim50Q810I2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
Trim50Q810I2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Trim50Q810I2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
Trim50Q810I2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim50Q810I2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Trim50Q810I2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim50Q810I2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trim50Q810I2 Gm10420-201ENSMUST00000121713 882 ntBASIC21.04■□□□□ 0.96
Trim50Q810I2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim50Q810I2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim50Q810I2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.03■□□□□ 0.96
Trim50Q810I2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim50Q810I2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Trim50Q810I2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim50Q810I2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.03■□□□□ 0.96
Trim50Q810I2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trim50Q810I2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trim50Q810I2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms