Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Upk3bQ80YF6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.37■□□□□ 0.53
Upk3bQ80YF6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
Upk3bQ80YF6 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Upk3bQ80YF6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.36■□□□□ 0.53
Upk3bQ80YF6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Upk3bQ80YF6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Mir3960-201ENSMUST00000198213 73 ntBASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bQ80YF6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Upk3bQ80YF6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.33■□□□□ 0.53
Upk3bQ80YF6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk3bQ80YF6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk3bQ80YF6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.33■□□□□ 0.53
Upk3bQ80YF6 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.33■□□□□ 0.53
Upk3bQ80YF6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Upk3bQ80YF6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.33■□□□□ 0.52
Upk3bQ80YF6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk3bQ80YF6 Terc-201ENSMUST00000082862 423 ntBASIC18.33■□□□□ 0.52
Upk3bQ80YF6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Upk3bQ80YF6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Gm8503-201ENSMUST00000118131 455 ntBASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bQ80YF6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk3bQ80YF6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Upk3bQ80YF6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Upk3bQ80YF6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bQ80YF6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bQ80YF6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.28■□□□□ 0.52
Upk3bQ80YF6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk3bQ80YF6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bQ80YF6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bQ80YF6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Upk3bQ80YF6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bQ80YF6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.27■□□□□ 0.52
Upk3bQ80YF6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bQ80YF6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bQ80YF6 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.27■□□□□ 0.52
Upk3bQ80YF6 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Upk3bQ80YF6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Upk3bQ80YF6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bQ80YF6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bQ80YF6 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bQ80YF6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.25■□□□□ 0.51
Upk3bQ80YF6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Upk3bQ80YF6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms