Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Otop1Q80VM9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Otop1Q80VM9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.89■□□□□ 0.93
Otop1Q80VM9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.88■□□□□ 0.93
Otop1Q80VM9 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
Otop1Q80VM9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Otop1Q80VM9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.87■□□□□ 0.93
Otop1Q80VM9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.86■□□□□ 0.93
Otop1Q80VM9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Otop1Q80VM9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Otop1Q80VM9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Otop1Q80VM9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Otop1Q80VM9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Otop1Q80VM9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Otop1Q80VM9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Otop1Q80VM9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Otop1Q80VM9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Otop1Q80VM9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Otop1Q80VM9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Otop1Q80VM9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Otop1Q80VM9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.83■□□□□ 0.93
Otop1Q80VM9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Otop1Q80VM9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Otop1Q80VM9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Otop1Q80VM9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Otop1Q80VM9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Otop1Q80VM9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Otop1Q80VM9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Otop1Q80VM9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Otop1Q80VM9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.82■□□□□ 0.92
Otop1Q80VM9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.82■□□□□ 0.92
Otop1Q80VM9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Otop1Q80VM9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Otop1Q80VM9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Otop1Q80VM9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.8■□□□□ 0.92
Otop1Q80VM9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.8■□□□□ 0.92
Otop1Q80VM9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.8■□□□□ 0.92
Otop1Q80VM9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Otop1Q80VM9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Otop1Q80VM9 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otop1Q80VM9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.79■□□□□ 0.92
Otop1Q80VM9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.79■□□□□ 0.92
Otop1Q80VM9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Otop1Q80VM9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Otop1Q80VM9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Otop1Q80VM9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Otop1Q80VM9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.77■□□□□ 0.92
Otop1Q80VM9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Otop1Q80VM9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Otop1Q80VM9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Otop1Q80VM9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.77■□□□□ 0.92
Otop1Q80VM9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Otop1Q80VM9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Otop1Q80VM9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Otop1Q80VM9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Otop1Q80VM9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Otop1Q80VM9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.76■□□□□ 0.91
Otop1Q80VM9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Otop1Q80VM9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Otop1Q80VM9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Otop1Q80VM9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Otop1Q80VM9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Otop1Q80VM9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.75■□□□□ 0.91
Otop1Q80VM9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.75■□□□□ 0.91
Otop1Q80VM9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Otop1Q80VM9 Gm40881-201ENSMUST00000223397 166 ntBASIC20.74■□□□□ 0.91
Otop1Q80VM9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Otop1Q80VM9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Otop1Q80VM9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.74■□□□□ 0.91
Otop1Q80VM9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Otop1Q80VM9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Otop1Q80VM9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Otop1Q80VM9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms