Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ush1gQ80T11 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ush1gQ80T11 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
Ush1gQ80T11 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ush1gQ80T11 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ush1gQ80T11 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ush1gQ80T11 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ush1gQ80T11 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.84■■□□□ 1.41
Ush1gQ80T11 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Ush1gQ80T11 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ush1gQ80T11 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ush1gQ80T11 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ush1gQ80T11 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ush1gQ80T11 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ush1gQ80T11 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.81■■□□□ 1.4
Ush1gQ80T11 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ush1gQ80T11 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ush1gQ80T11 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ush1gQ80T11 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ush1gQ80T11 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ush1gQ80T11 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ush1gQ80T11 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ush1gQ80T11 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ush1gQ80T11 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ush1gQ80T11 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ush1gQ80T11 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ush1gQ80T11 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.78■■□□□ 1.4
Ush1gQ80T11 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ush1gQ80T11 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ush1gQ80T11 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ush1gQ80T11 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ush1gQ80T11 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ush1gQ80T11 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ush1gQ80T11 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.75■■□□□ 1.39
Ush1gQ80T11 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ush1gQ80T11 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ush1gQ80T11 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ush1gQ80T11 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ush1gQ80T11 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ush1gQ80T11 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.71■■□□□ 1.39
Ush1gQ80T11 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.71■■□□□ 1.39
Ush1gQ80T11 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ush1gQ80T11 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.71■■□□□ 1.39
Ush1gQ80T11 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ush1gQ80T11 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ush1gQ80T11 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ush1gQ80T11 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms