Protein–RNA interactions for Protein: Q7TMI3

Uhrf2, E3 ubiquitin-protein ligase UHRF2, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf2Q7TMI3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uhrf2Q7TMI3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
Uhrf2Q7TMI3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.4■□□□□ 0.7
Uhrf2Q7TMI3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.4■□□□□ 0.7
Uhrf2Q7TMI3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Uhrf2Q7TMI3 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Uhrf2Q7TMI3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Gm6311-201ENSMUST00000073790 878 ntBASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Uhrf2Q7TMI3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Uhrf2Q7TMI3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Uhrf2Q7TMI3 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Uhrf2Q7TMI3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Uhrf2Q7TMI3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Uhrf2Q7TMI3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Uhrf2Q7TMI3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Uhrf2Q7TMI3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Uhrf2Q7TMI3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Uhrf2Q7TMI3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.33■□□□□ 0.69
Uhrf2Q7TMI3 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.33■□□□□ 0.69
Uhrf2Q7TMI3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Uhrf2Q7TMI3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Uhrf2Q7TMI3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Uhrf2Q7TMI3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Uhrf2Q7TMI3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Uhrf2Q7TMI3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Uhrf2Q7TMI3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.3■□□□□ 0.68
Uhrf2Q7TMI3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.3■□□□□ 0.68
Uhrf2Q7TMI3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Uhrf2Q7TMI3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Uhrf2Q7TMI3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Uhrf2Q7TMI3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Uhrf2Q7TMI3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.27■□□□□ 0.68
Uhrf2Q7TMI3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Uhrf2Q7TMI3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.27■□□□□ 0.68
Uhrf2Q7TMI3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Uhrf2Q7TMI3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.26■□□□□ 0.67
Uhrf2Q7TMI3 Gm44428-201ENSMUST00000204474 874 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms