Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vma21Q78T54 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vma21Q78T54 Gm45364-201ENSMUST00000210883 159 ntBASIC17.69■□□□□ 0.42
Vma21Q78T54 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vma21Q78T54 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.69■□□□□ 0.42
Vma21Q78T54 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Vma21Q78T54 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Vma21Q78T54 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vma21Q78T54 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.68■□□□□ 0.42
Vma21Q78T54 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Vma21Q78T54 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vma21Q78T54 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.68■□□□□ 0.42
Vma21Q78T54 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vma21Q78T54 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Vma21Q78T54 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vma21Q78T54 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vma21Q78T54 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.67■□□□□ 0.42
Vma21Q78T54 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vma21Q78T54 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vma21Q78T54 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Vma21Q78T54 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vma21Q78T54 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vma21Q78T54 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vma21Q78T54 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.66■□□□□ 0.42
Vma21Q78T54 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vma21Q78T54 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Vma21Q78T54 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Vma21Q78T54 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vma21Q78T54 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vma21Q78T54 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vma21Q78T54 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vma21Q78T54 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Vma21Q78T54 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vma21Q78T54 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vma21Q78T54 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vma21Q78T54 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Vma21Q78T54 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vma21Q78T54 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vma21Q78T54 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.64■□□□□ 0.41
Vma21Q78T54 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vma21Q78T54 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vma21Q78T54 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.64■□□□□ 0.41
Vma21Q78T54 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.63■□□□□ 0.41
Vma21Q78T54 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Vma21Q78T54 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vma21Q78T54 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vma21Q78T54 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Vma21Q78T54 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vma21Q78T54 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Vma21Q78T54 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vma21Q78T54 Gm22567-201ENSMUST00000175542 342 ntBASIC17.62■□□□□ 0.41
Vma21Q78T54 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vma21Q78T54 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vma21Q78T54 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vma21Q78T54 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.61■□□□□ 0.41
Vma21Q78T54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vma21Q78T54 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Vma21Q78T54 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vma21Q78T54 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vma21Q78T54 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Vma21Q78T54 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vma21Q78T54 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Vma21Q78T54 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vma21Q78T54 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Vma21Q78T54 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Vma21Q78T54 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vma21Q78T54 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vma21Q78T54 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.58■□□□□ 0.4
Vma21Q78T54 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.58■□□□□ 0.4
Vma21Q78T54 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vma21Q78T54 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.58■□□□□ 0.4
Vma21Q78T54 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vma21Q78T54 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vma21Q78T54 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vma21Q78T54 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vma21Q78T54 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vma21Q78T54 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vma21Q78T54 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.57■□□□□ 0.4
Vma21Q78T54 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.57■□□□□ 0.4
Vma21Q78T54 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Vma21Q78T54 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Vma21Q78T54 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vma21Q78T54 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Vma21Q78T54 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vma21Q78T54 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Vma21Q78T54 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Vma21Q78T54 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Vma21Q78T54 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Vma21Q78T54 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms