Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx58Q6Q899 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
Ddx58Q6Q899 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ddx58Q6Q899 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ddx58Q6Q899 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx58Q6Q899 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ddx58Q6Q899 Gm6934-201ENSMUST00000194780 1905 ntBASIC27.2■■□□□ 1.94
Ddx58Q6Q899 Gm10232-201ENSMUST00000089221 720 ntBASIC27.19■■□□□ 1.94
Ddx58Q6Q899 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ddx58Q6Q899 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Ddx58Q6Q899 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx58Q6Q899 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.18■■□□□ 1.94
Ddx58Q6Q899 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ddx58Q6Q899 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
Ddx58Q6Q899 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ddx58Q6Q899 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC27.17■■□□□ 1.94
Ddx58Q6Q899 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ddx58Q6Q899 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
Ddx58Q6Q899 Gm22567-201ENSMUST00000175542 342 ntBASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Rps24-207ENSMUST00000224568 714 ntBASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Nsd1-206ENSMUST00000224918 1001 ntBASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ddx58Q6Q899 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
Ddx58Q6Q899 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ddx58Q6Q899 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
Ddx58Q6Q899 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ddx58Q6Q899 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ddx58Q6Q899 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Ddx58Q6Q899 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC27.13■■□□□ 1.93
Ddx58Q6Q899 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx58Q6Q899 Gm16464-201ENSMUST00000117815 1095 ntBASIC27.13■■□□□ 1.93
Ddx58Q6Q899 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.13■■□□□ 1.93
Ddx58Q6Q899 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Ddx58Q6Q899 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx58Q6Q899 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC27.12■■□□□ 1.93
Ddx58Q6Q899 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC27.12■■□□□ 1.93
Ddx58Q6Q899 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC27.12■■□□□ 1.93
Ddx58Q6Q899 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ddx58Q6Q899 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Ddx58Q6Q899 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx58Q6Q899 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Ddx58Q6Q899 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Gm45102-201ENSMUST00000207427 857 ntBASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Ddx58Q6Q899 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx58Q6Q899 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx58Q6Q899 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Ddx58Q6Q899 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC27.08■■□□□ 1.93
Ddx58Q6Q899 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Ddx58Q6Q899 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Gm9959-201ENSMUST00000068277 390 ntBASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Gm28536-201ENSMUST00000190971 1317 ntBASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ddx58Q6Q899 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ddx58Q6Q899 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ddx58Q6Q899 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Ddx58Q6Q899 Gm14117-201ENSMUST00000122417 843 ntBASIC27.03■■□□□ 1.92
Ddx58Q6Q899 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC27.03■■□□□ 1.92
Ddx58Q6Q899 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
Ddx58Q6Q899 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC27.01■■□□□ 1.91
Ddx58Q6Q899 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Ddx58Q6Q899 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx58Q6Q899 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx58Q6Q899 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC27■■□□□ 1.91
Ddx58Q6Q899 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
Ddx58Q6Q899 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx58Q6Q899 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx58Q6Q899 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx58Q6Q899 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Ddx58Q6Q899 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Ddx58Q6Q899 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC26.98■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms