Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.05■□□□□ 0.96
Cpsf6Q6NVF9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cpsf6Q6NVF9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cpsf6Q6NVF9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf6Q6NVF9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf6Q6NVF9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf6Q6NVF9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf6Q6NVF9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf6Q6NVF9 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf6Q6NVF9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf6Q6NVF9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21■□□□□ 0.95
Cpsf6Q6NVF9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf6Q6NVF9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cpsf6Q6NVF9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cpsf6Q6NVF9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cpsf6Q6NVF9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cpsf6Q6NVF9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cpsf6Q6NVF9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Cpsf6Q6NVF9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Gm11175-201ENSMUST00000116172 543 ntBASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cpsf6Q6NVF9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cpsf6Q6NVF9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf6Q6NVF9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf6Q6NVF9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.93■□□□□ 0.94
Cpsf6Q6NVF9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf6Q6NVF9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf6Q6NVF9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf6Q6NVF9 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf6Q6NVF9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf6Q6NVF9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.89■□□□□ 0.94
Cpsf6Q6NVF9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf6Q6NVF9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.89■□□□□ 0.93
Cpsf6Q6NVF9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf6Q6NVF9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.89■□□□□ 0.93
Cpsf6Q6NVF9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf6Q6NVF9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms