Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.43■■□□□ 1.82
Scn9aQ62205 Appbp2os-202ENSMUST00000206972 447 ntBASIC26.42■■□□□ 1.82
Scn9aQ62205 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Scn9aQ62205 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Scn9aQ62205 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
Scn9aQ62205 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Scn9aQ62205 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn9aQ62205 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Scn9aQ62205 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.4■■□□□ 1.82
Scn9aQ62205 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scn9aQ62205 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Scn9aQ62205 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC26.4■■□□□ 1.82
Scn9aQ62205 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scn9aQ62205 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Scn9aQ62205 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scn9aQ62205 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Scn9aQ62205 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC26.39■■□□□ 1.82
Scn9aQ62205 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
Scn9aQ62205 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Scn9aQ62205 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.38■■□□□ 1.81
Scn9aQ62205 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Scn9aQ62205 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Scn9aQ62205 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Scn9aQ62205 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.37■■□□□ 1.81
Scn9aQ62205 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
Scn9aQ62205 Gm27454-201ENSMUST00000185090 204 ntBASIC26.37■■□□□ 1.81
Scn9aQ62205 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Scn9aQ62205 Gm40881-201ENSMUST00000223397 166 ntBASIC26.36■■□□□ 1.81
Scn9aQ62205 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Scn9aQ62205 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Scn9aQ62205 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Scn9aQ62205 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scn9aQ62205 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Scn9aQ62205 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
Scn9aQ62205 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scn9aQ62205 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scn9aQ62205 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Scn9aQ62205 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn9aQ62205 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Scn9aQ62205 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn9aQ62205 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn9aQ62205 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn9aQ62205 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC26.31■■□□□ 1.8
Scn9aQ62205 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.31■■□□□ 1.8
Scn9aQ62205 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn9aQ62205 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn9aQ62205 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Scn9aQ62205 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC26.31■■□□□ 1.8
Scn9aQ62205 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scn9aQ62205 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Scn9aQ62205 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn9aQ62205 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn9aQ62205 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Scn9aQ62205 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.3■■□□□ 1.8
Scn9aQ62205 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.3■■□□□ 1.8
Scn9aQ62205 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Scn9aQ62205 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scn9aQ62205 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scn9aQ62205 AC140930.3-201ENSMUST00000222935 274 ntBASIC26.29■■□□□ 1.8
Scn9aQ62205 Gm45417-201ENSMUST00000209533 758 ntBASIC26.29■■□□□ 1.8
Scn9aQ62205 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC26.29■■□□□ 1.8
Scn9aQ62205 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Scn9aQ62205 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scn9aQ62205 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Scn9aQ62205 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn9aQ62205 Gm12821-201ENSMUST00000120022 600 ntBASIC26.27■■□□□ 1.8
Scn9aQ62205 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC26.27■■□□□ 1.8
Scn9aQ62205 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn9aQ62205 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn9aQ62205 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn9aQ62205 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scn9aQ62205 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC26.27■■□□□ 1.8
Scn9aQ62205 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
Scn9aQ62205 Slc35b2-207ENSMUST00000226086 850 ntBASIC26.26■■□□□ 1.79
Scn9aQ62205 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn9aQ62205 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn9aQ62205 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
Scn9aQ62205 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scn9aQ62205 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.26■■□□□ 1.79
Scn9aQ62205 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.25■■□□□ 1.79
Scn9aQ62205 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn9aQ62205 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scn9aQ62205 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.24■■□□□ 1.79
Scn9aQ62205 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn9aQ62205 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.22■■□□□ 1.79
Scn9aQ62205 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn9aQ62205 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC26.22■■□□□ 1.79
Scn9aQ62205 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn9aQ62205 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Scn9aQ62205 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scn9aQ62205 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Scn9aQ62205 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Scn9aQ62205 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.2■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms