Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Runx1t1Q61909 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Runx1t1Q61909 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.68■□□□□ 0.9
Runx1t1Q61909 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Runx1t1Q61909 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Runx1t1Q61909 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Runx1t1Q61909 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.66■□□□□ 0.9
Runx1t1Q61909 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Runx1t1Q61909 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Runx1t1Q61909 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Runx1t1Q61909 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Runx1t1Q61909 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Runx1t1Q61909 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Runx1t1Q61909 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Runx1t1Q61909 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
Runx1t1Q61909 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Runx1t1Q61909 Scarna2-201ENSMUST00000157560 414 ntBASIC20.64■□□□□ 0.89
Runx1t1Q61909 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Runx1t1Q61909 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Runx1t1Q61909 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Runx1t1Q61909 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Runx1t1Q61909 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Runx1t1Q61909 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Runx1t1Q61909 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
Runx1t1Q61909 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Runx1t1Q61909 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Runx1t1Q61909 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Runx1t1Q61909 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.62■□□□□ 0.89
Runx1t1Q61909 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Runx1t1Q61909 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Runx1t1Q61909 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Runx1t1Q61909 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Runx1t1Q61909 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.6■□□□□ 0.89
Runx1t1Q61909 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Runx1t1Q61909 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Runx1t1Q61909 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Runx1t1Q61909 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Runx1t1Q61909 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Runx1t1Q61909 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.59■□□□□ 0.89
Runx1t1Q61909 Gm16437-201ENSMUST00000025669 507 ntBASIC20.59■□□□□ 0.89
Runx1t1Q61909 Gm9806-201ENSMUST00000051080 552 ntBASIC20.59■□□□□ 0.89
Runx1t1Q61909 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Runx1t1Q61909 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Runx1t1Q61909 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Runx1t1Q61909 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Runx1t1Q61909 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Runx1t1Q61909 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Runx1t1Q61909 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.57■□□□□ 0.88
Runx1t1Q61909 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Runx1t1Q61909 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Runx1t1Q61909 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Runx1t1Q61909 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.56■□□□□ 0.88
Runx1t1Q61909 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.55■□□□□ 0.88
Runx1t1Q61909 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Runx1t1Q61909 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.55■□□□□ 0.88
Runx1t1Q61909 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Runx1t1Q61909 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Runx1t1Q61909 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Runx1t1Q61909 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Runx1t1Q61909 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Runx1t1Q61909 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms