Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Sdf4Q61112 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Sdf4Q61112 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Sdf4Q61112 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Sdf4Q61112 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Sdf4Q61112 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sdf4Q61112 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sdf4Q61112 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sdf4Q61112 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sdf4Q61112 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Sdf4Q61112 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.04■■□□□ 1.12
Sdf4Q61112 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Sdf4Q61112 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sdf4Q61112 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sdf4Q61112 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sdf4Q61112 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sdf4Q61112 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.03■■□□□ 1.12
Sdf4Q61112 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sdf4Q61112 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sdf4Q61112 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sdf4Q61112 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sdf4Q61112 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.02■■□□□ 1.12
Sdf4Q61112 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sdf4Q61112 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sdf4Q61112 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sdf4Q61112 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sdf4Q61112 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Sdf4Q61112 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Sdf4Q61112 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sdf4Q61112 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sdf4Q61112 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sdf4Q61112 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sdf4Q61112 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sdf4Q61112 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Sdf4Q61112 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sdf4Q61112 Cap2-205ENSMUST00000225824 1634 ntBASIC22■■□□□ 1.11
Sdf4Q61112 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
Sdf4Q61112 Gm10420-201ENSMUST00000121713 882 ntBASIC22■■□□□ 1.11
Sdf4Q61112 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22■■□□□ 1.11
Sdf4Q61112 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Sdf4Q61112 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sdf4Q61112 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.99■■□□□ 1.11
Sdf4Q61112 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sdf4Q61112 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Sdf4Q61112 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.99■■□□□ 1.11
Sdf4Q61112 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Sdf4Q61112 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Sdf4Q61112 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sdf4Q61112 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sdf4Q61112 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sdf4Q61112 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sdf4Q61112 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sdf4Q61112 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sdf4Q61112 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
Sdf4Q61112 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.97■■□□□ 1.11
Sdf4Q61112 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Sdf4Q61112 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sdf4Q61112 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sdf4Q61112 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sdf4Q61112 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.95■■□□□ 1.1
Sdf4Q61112 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sdf4Q61112 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sdf4Q61112 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sdf4Q61112 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Sdf4Q61112 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sdf4Q61112 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Sdf4Q61112 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.94■■□□□ 1.1
Sdf4Q61112 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.94■■□□□ 1.1
Sdf4Q61112 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Sdf4Q61112 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sdf4Q61112 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sdf4Q61112 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sdf4Q61112 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sdf4Q61112 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sdf4Q61112 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.92■■□□□ 1.1
Sdf4Q61112 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Sdf4Q61112 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Sdf4Q61112 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sdf4Q61112 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.91■■□□□ 1.1
Sdf4Q61112 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.91■■□□□ 1.1
Sdf4Q61112 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Sdf4Q61112 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Sdf4Q61112 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Sdf4Q61112 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.9■■□□□ 1.1
Sdf4Q61112 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Sdf4Q61112 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Sdf4Q61112 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Sdf4Q61112 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms