Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd3Q61060 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Foxd3Q61060 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd3Q61060 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Foxd3Q61060 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd3Q61060 Gm22567-201ENSMUST00000175542 342 ntBASIC19.81■□□□□ 0.76
Foxd3Q61060 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd3Q61060 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.81■□□□□ 0.76
Foxd3Q61060 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd3Q61060 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Foxd3Q61060 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Foxd3Q61060 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd3Q61060 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Foxd3Q61060 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd3Q61060 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd3Q61060 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Foxd3Q61060 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Foxd3Q61060 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd3Q61060 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Foxd3Q61060 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd3Q61060 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd3Q61060 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Foxd3Q61060 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd3Q61060 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd3Q61060 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Foxd3Q61060 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
Foxd3Q61060 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Foxd3Q61060 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.78■□□□□ 0.76
Foxd3Q61060 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Foxd3Q61060 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.78■□□□□ 0.76
Foxd3Q61060 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Foxd3Q61060 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.77■□□□□ 0.76
Foxd3Q61060 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Foxd3Q61060 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Foxd3Q61060 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.76■□□□□ 0.75
Foxd3Q61060 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd3Q61060 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Foxd3Q61060 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd3Q61060 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.76■□□□□ 0.75
Foxd3Q61060 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd3Q61060 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxd3Q61060 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Foxd3Q61060 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.75■□□□□ 0.75
Foxd3Q61060 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Foxd3Q61060 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Foxd3Q61060 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxd3Q61060 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxd3Q61060 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxd3Q61060 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.74■□□□□ 0.75
Foxd3Q61060 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.74■□□□□ 0.75
Foxd3Q61060 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Foxd3Q61060 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxd3Q61060 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Foxd3Q61060 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxd3Q61060 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Foxd3Q61060 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.73■□□□□ 0.75
Foxd3Q61060 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxd3Q61060 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxd3Q61060 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxd3Q61060 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Foxd3Q61060 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Foxd3Q61060 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Foxd3Q61060 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxd3Q61060 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxd3Q61060 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Foxd3Q61060 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Foxd3Q61060 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Foxd3Q61060 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.71■□□□□ 0.75
Foxd3Q61060 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Foxd3Q61060 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxd3Q61060 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Foxd3Q61060 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.7■□□□□ 0.74
Foxd3Q61060 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.7■□□□□ 0.74
Foxd3Q61060 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.7■□□□□ 0.74
Foxd3Q61060 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxd3Q61060 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms