Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Col12a1Q60847 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Col12a1Q60847 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col12a1Q60847 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col12a1Q60847 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col12a1Q60847 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.22■■□□□ 1.15
Col12a1Q60847 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col12a1Q60847 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col12a1Q60847 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.22■■□□□ 1.15
Col12a1Q60847 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Col12a1Q60847 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col12a1Q60847 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Col12a1Q60847 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Col12a1Q60847 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col12a1Q60847 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Col12a1Q60847 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col12a1Q60847 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.19■■□□□ 1.14
Col12a1Q60847 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col12a1Q60847 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.19■■□□□ 1.14
Col12a1Q60847 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.19■■□□□ 1.14
Col12a1Q60847 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col12a1Q60847 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col12a1Q60847 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col12a1Q60847 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col12a1Q60847 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Col12a1Q60847 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col12a1Q60847 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.17■■□□□ 1.14
Col12a1Q60847 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col12a1Q60847 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.16■■□□□ 1.14
Col12a1Q60847 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.16■■□□□ 1.14
Col12a1Q60847 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col12a1Q60847 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.15■■□□□ 1.14
Col12a1Q60847 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.15■■□□□ 1.14
Col12a1Q60847 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.15■■□□□ 1.14
Col12a1Q60847 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
Col12a1Q60847 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col12a1Q60847 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.14■■□□□ 1.13
Col12a1Q60847 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col12a1Q60847 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Col12a1Q60847 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col12a1Q60847 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Col12a1Q60847 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col12a1Q60847 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Col12a1Q60847 Gm6139-201ENSMUST00000079261 882 ntBASIC22.13■■□□□ 1.13
Col12a1Q60847 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col12a1Q60847 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col12a1Q60847 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col12a1Q60847 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col12a1Q60847 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.13■■□□□ 1.13
Col12a1Q60847 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.13■■□□□ 1.13
Col12a1Q60847 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Col12a1Q60847 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Col12a1Q60847 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Col12a1Q60847 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Col12a1Q60847 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.11■■□□□ 1.13
Col12a1Q60847 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col12a1Q60847 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC22.1■■□□□ 1.13
Col12a1Q60847 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Col12a1Q60847 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col12a1Q60847 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Col12a1Q60847 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col12a1Q60847 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
Col12a1Q60847 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col12a1Q60847 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col12a1Q60847 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col12a1Q60847 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.09■■□□□ 1.13
Col12a1Q60847 Gm27011-201ENSMUST00000182352 972 ntBASIC22.09■■□□□ 1.13
Col12a1Q60847 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.09■■□□□ 1.13
Col12a1Q60847 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col12a1Q60847 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col12a1Q60847 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Col12a1Q60847 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Col12a1Q60847 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Col12a1Q60847 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col12a1Q60847 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.08■■□□□ 1.13
Col12a1Q60847 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col12a1Q60847 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Col12a1Q60847 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col12a1Q60847 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col12a1Q60847 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Col12a1Q60847 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Col12a1Q60847 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col12a1Q60847 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col12a1Q60847 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.07■■□□□ 1.12
Col12a1Q60847 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Col12a1Q60847 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.07■■□□□ 1.12
Col12a1Q60847 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Col12a1Q60847 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.06■■□□□ 1.12
Col12a1Q60847 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col12a1Q60847 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col12a1Q60847 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.06■■□□□ 1.12
Col12a1Q60847 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Col12a1Q60847 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms