Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav3-3Q5R1C3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.25■□□□□ 0.19
Trav3-3Q5R1C3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav3-3Q5R1C3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav3-3Q5R1C3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3-3Q5R1C3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.22■□□□□ 0.19
Trav3-3Q5R1C3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3-3Q5R1C3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav3-3Q5R1C3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3-3Q5R1C3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Trav3-3Q5R1C3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav3-3Q5R1C3 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.21■□□□□ 0.19
Trav3-3Q5R1C3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav3-3Q5R1C3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Gm24970-201ENSMUST00000175582 82 ntBASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav3-3Q5R1C3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav3-3Q5R1C3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav3-3Q5R1C3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav3-3Q5R1C3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav3-3Q5R1C3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Gm9397-201ENSMUST00000200125 605 ntBASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav3-3Q5R1C3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Trav3-3Q5R1C3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav3-3Q5R1C3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trav3-3Q5R1C3 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav3-3Q5R1C3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav3-3Q5R1C3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav3-3Q5R1C3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms