Protein–RNA interactions for Protein: Q5FWC9

Gm3558, Predicted gene 3558, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3558Q5FWC9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3558Q5FWC9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3558Q5FWC9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Gm3558Q5FWC9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Gm3558Q5FWC9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3558Q5FWC9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3558Q5FWC9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Gm3558Q5FWC9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Gm3558Q5FWC9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Gm3558Q5FWC9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm3558Q5FWC9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3558Q5FWC9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3558Q5FWC9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3558Q5FWC9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Gm3558Q5FWC9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm3558Q5FWC9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Gm3558Q5FWC9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm3558Q5FWC9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Gm9812-201ENSMUST00000061934 968 ntBASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm3558Q5FWC9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm3558Q5FWC9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm3558Q5FWC9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm3558Q5FWC9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm3558Q5FWC9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gm3558Q5FWC9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3558Q5FWC9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Gm3558Q5FWC9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms