Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Pfdn4Q3UWL8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.17■□□□□ 0.98
Pfdn4Q3UWL8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pfdn4Q3UWL8 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pfdn4Q3UWL8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pfdn4Q3UWL8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.16■□□□□ 0.98
Pfdn4Q3UWL8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.15■□□□□ 0.98
Pfdn4Q3UWL8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pfdn4Q3UWL8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pfdn4Q3UWL8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pfdn4Q3UWL8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
Pfdn4Q3UWL8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pfdn4Q3UWL8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pfdn4Q3UWL8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.14■□□□□ 0.98
Pfdn4Q3UWL8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Terc-201ENSMUST00000082862 423 ntBASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pfdn4Q3UWL8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pfdn4Q3UWL8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pfdn4Q3UWL8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pfdn4Q3UWL8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pfdn4Q3UWL8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pfdn4Q3UWL8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.12■□□□□ 0.97
Pfdn4Q3UWL8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Pfdn4Q3UWL8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.11■□□□□ 0.97
Pfdn4Q3UWL8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pfdn4Q3UWL8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pfdn4Q3UWL8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pfdn4Q3UWL8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pfdn4Q3UWL8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn4Q3UWL8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Pfdn4Q3UWL8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pfdn4Q3UWL8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pfdn4Q3UWL8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn4Q3UWL8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pfdn4Q3UWL8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pfdn4Q3UWL8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn4Q3UWL8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms