Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.77■□□□□ 0.6
Shisa3Q3UPR0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa3Q3UPR0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa3Q3UPR0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa3Q3UPR0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa3Q3UPR0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Shisa3Q3UPR0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Shisa3Q3UPR0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa3Q3UPR0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa3Q3UPR0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa3Q3UPR0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Shisa3Q3UPR0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Shisa3Q3UPR0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.73■□□□□ 0.59
Shisa3Q3UPR0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa3Q3UPR0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa3Q3UPR0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa3Q3UPR0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa3Q3UPR0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shisa3Q3UPR0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.71■□□□□ 0.59
Shisa3Q3UPR0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa3Q3UPR0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa3Q3UPR0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa3Q3UPR0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shisa3Q3UPR0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.71■□□□□ 0.58
Shisa3Q3UPR0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shisa3Q3UPR0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa3Q3UPR0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa3Q3UPR0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa3Q3UPR0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shisa3Q3UPR0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shisa3Q3UPR0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Shisa3Q3UPR0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Shisa3Q3UPR0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa3Q3UPR0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa3Q3UPR0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa3Q3UPR0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa3Q3UPR0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Shisa3Q3UPR0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Shisa3Q3UPR0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Shisa3Q3UPR0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa3Q3UPR0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Shisa3Q3UPR0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.65■□□□□ 0.58
Shisa3Q3UPR0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa3Q3UPR0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Shisa3Q3UPR0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa3Q3UPR0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Shisa3Q3UPR0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Shisa3Q3UPR0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa3Q3UPR0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa3Q3UPR0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Shisa3Q3UPR0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Shisa3Q3UPR0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa3Q3UPR0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa3Q3UPR0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa3Q3UPR0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Shisa3Q3UPR0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Shisa3Q3UPR0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms