Protein–RNA interactions for Protein: Q3UKJ7

Smu1, WD40 repeat-containing protein SMU1, mousemouse

Known RBP Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smu1Q3UKJ7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Smu1Q3UKJ7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smu1Q3UKJ7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smu1Q3UKJ7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smu1Q3UKJ7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Smu1Q3UKJ7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.83■□□□□ 0.93
Smu1Q3UKJ7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smu1Q3UKJ7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smu1Q3UKJ7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smu1Q3UKJ7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smu1Q3UKJ7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Smu1Q3UKJ7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smu1Q3UKJ7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smu1Q3UKJ7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.78■□□□□ 0.92
Smu1Q3UKJ7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smu1Q3UKJ7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smu1Q3UKJ7 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smu1Q3UKJ7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.76■□□□□ 0.91
Smu1Q3UKJ7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Smu1Q3UKJ7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
Smu1Q3UKJ7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms