Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cap2-205ENSMUST00000225824 1634 ntBASIC23.82■■□□□ 1.4
Trim43cP86449 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim43cP86449 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Trim43cP86449 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim43cP86449 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim43cP86449 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.81■■□□□ 1.4
Trim43cP86449 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim43cP86449 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trim43cP86449 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.81■■□□□ 1.4
Trim43cP86449 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
Trim43cP86449 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim43cP86449 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim43cP86449 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim43cP86449 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
Trim43cP86449 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Trim43cP86449 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim43cP86449 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Trim43cP86449 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Trim43cP86449 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.8■■□□□ 1.4
Trim43cP86449 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.79■■□□□ 1.4
Trim43cP86449 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim43cP86449 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim43cP86449 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim43cP86449 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Trim43cP86449 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim43cP86449 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.77■■□□□ 1.4
Trim43cP86449 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim43cP86449 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim43cP86449 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Trim43cP86449 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim43cP86449 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim43cP86449 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Trim43cP86449 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim43cP86449 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Trim43cP86449 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim43cP86449 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trim43cP86449 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim43cP86449 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim43cP86449 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim43cP86449 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim43cP86449 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim43cP86449 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Trim43cP86449 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim43cP86449 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim43cP86449 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim43cP86449 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim43cP86449 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim43cP86449 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim43cP86449 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim43cP86449 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.73■■□□□ 1.39
Trim43cP86449 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim43cP86449 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim43cP86449 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trim43cP86449 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Trim43cP86449 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim43cP86449 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.72■■□□□ 1.39
Trim43cP86449 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim43cP86449 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim43cP86449 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim43cP86449 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim43cP86449 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim43cP86449 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.71■■□□□ 1.39
Trim43cP86449 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim43cP86449 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim43cP86449 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim43cP86449 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim43cP86449 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trim43cP86449 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.7■■□□□ 1.39
Trim43cP86449 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim43cP86449 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.7■■□□□ 1.38
Trim43cP86449 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.7■■□□□ 1.38
Trim43cP86449 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim43cP86449 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim43cP86449 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim43cP86449 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim43cP86449 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Trim43cP86449 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim43cP86449 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Trim43cP86449 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Trim43cP86449 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Trim43cP86449 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim43cP86449 Gm10420-201ENSMUST00000121713 882 ntBASIC23.68■■□□□ 1.38
Trim43cP86449 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim43cP86449 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim43cP86449 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim43cP86449 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim43cP86449 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 371.6 ms