Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
H3f3aP84244 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3f3aP84244 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
H3f3aP84244 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
H3f3aP84244 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
H3f3aP84244 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
H3f3aP84244 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
H3f3aP84244 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.4■□□□□ 0.7
H3f3aP84244 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3f3aP84244 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
H3f3aP84244 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
H3f3aP84244 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.39■□□□□ 0.7
H3f3aP84244 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3f3aP84244 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3f3aP84244 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
H3f3aP84244 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
H3f3aP84244 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
H3f3aP84244 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H3f3aP84244 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3f3aP84244 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
H3f3aP84244 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
H3f3aP84244 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
H3f3aP84244 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
H3f3aP84244 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3aP84244 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3aP84244 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3aP84244 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
H3f3aP84244 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.37■□□□□ 0.69
H3f3aP84244 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3aP84244 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
H3f3aP84244 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3f3aP84244 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
H3f3aP84244 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.36■□□□□ 0.69
H3f3aP84244 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.35■□□□□ 0.69
H3f3aP84244 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3aP84244 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
H3f3aP84244 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3aP84244 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.34■□□□□ 0.69
H3f3aP84244 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3aP84244 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.34■□□□□ 0.69
H3f3aP84244 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
H3f3aP84244 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
H3f3aP84244 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3f3aP84244 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3f3aP84244 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.33■□□□□ 0.69
H3f3aP84244 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
H3f3aP84244 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3f3aP84244 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
H3f3aP84244 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3f3aP84244 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
H3f3aP84244 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.32■□□□□ 0.68
H3f3aP84244 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3f3aP84244 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3f3aP84244 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.32■□□□□ 0.68
H3f3aP84244 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
H3f3aP84244 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
H3f3aP84244 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3f3aP84244 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3f3aP84244 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3f3aP84244 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
H3f3aP84244 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
H3f3aP84244 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3aP84244 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3aP84244 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3aP84244 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.3■□□□□ 0.68
H3f3aP84244 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
H3f3aP84244 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
H3f3aP84244 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
H3f3aP84244 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
H3f3aP84244 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3f3aP84244 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
H3f3aP84244 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
H3f3aP84244 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
H3f3aP84244 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3aP84244 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3aP84244 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3aP84244 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
H3f3aP84244 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.27■□□□□ 0.68
H3f3aP84244 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3f3aP84244 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
H3f3aP84244 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
H3f3aP84244 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
H3f3aP84244 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3f3aP84244 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms