Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.37■□□□□ 0.69
SgcbP82349 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SgcbP82349 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcbP82349 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SgcbP82349 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SgcbP82349 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.35■□□□□ 0.69
SgcbP82349 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcbP82349 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SgcbP82349 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SgcbP82349 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SgcbP82349 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SgcbP82349 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SgcbP82349 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SgcbP82349 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SgcbP82349 Gm5921-201ENSMUST00000075898 882 ntBASIC19.33■□□□□ 0.68
SgcbP82349 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SgcbP82349 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SgcbP82349 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SgcbP82349 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SgcbP82349 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.33■□□□□ 0.68
SgcbP82349 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SgcbP82349 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.32■□□□□ 0.68
SgcbP82349 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SgcbP82349 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SgcbP82349 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
SgcbP82349 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.31■□□□□ 0.68
SgcbP82349 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
SgcbP82349 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.31■□□□□ 0.68
SgcbP82349 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SgcbP82349 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.3■□□□□ 0.68
SgcbP82349 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SgcbP82349 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.3■□□□□ 0.68
SgcbP82349 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.3■□□□□ 0.68
SgcbP82349 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.3■□□□□ 0.68
SgcbP82349 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SgcbP82349 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SgcbP82349 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SgcbP82349 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SgcbP82349 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SgcbP82349 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.29■□□□□ 0.68
SgcbP82349 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SgcbP82349 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SgcbP82349 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcbP82349 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcbP82349 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SgcbP82349 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.27■□□□□ 0.68
SgcbP82349 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.27■□□□□ 0.68
SgcbP82349 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.27■□□□□ 0.68
SgcbP82349 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SgcbP82349 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SgcbP82349 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SgcbP82349 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SgcbP82349 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SgcbP82349 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.25■□□□□ 0.67
SgcbP82349 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SgcbP82349 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.25■□□□□ 0.67
SgcbP82349 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.25■□□□□ 0.67
SgcbP82349 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SgcbP82349 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SgcbP82349 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms