Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ThraP63058 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ThraP63058 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
ThraP63058 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ThraP63058 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ThraP63058 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
ThraP63058 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ThraP63058 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ThraP63058 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ThraP63058 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
ThraP63058 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.89■■□□□ 1.1
ThraP63058 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ThraP63058 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ThraP63058 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.88■■□□□ 1.09
ThraP63058 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ThraP63058 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ThraP63058 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ThraP63058 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
ThraP63058 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ThraP63058 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ThraP63058 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ThraP63058 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ThraP63058 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ThraP63058 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ThraP63058 Gm5812-201ENSMUST00000061073 957 ntBASIC21.85■■□□□ 1.09
ThraP63058 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.85■■□□□ 1.09
ThraP63058 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ThraP63058 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ThraP63058 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ThraP63058 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ThraP63058 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
ThraP63058 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ThraP63058 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
ThraP63058 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ThraP63058 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
ThraP63058 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ThraP63058 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ThraP63058 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
ThraP63058 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
ThraP63058 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.82■■□□□ 1.08
ThraP63058 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ThraP63058 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ThraP63058 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ThraP63058 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
ThraP63058 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ThraP63058 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ThraP63058 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
ThraP63058 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ThraP63058 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ThraP63058 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ThraP63058 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
ThraP63058 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.79■■□□□ 1.08
ThraP63058 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ThraP63058 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.79■■□□□ 1.08
ThraP63058 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ThraP63058 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.78■■□□□ 1.08
ThraP63058 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
ThraP63058 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ThraP63058 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ThraP63058 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ThraP63058 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.77■■□□□ 1.08
ThraP63058 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ThraP63058 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ThraP63058 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ThraP63058 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
ThraP63058 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ThraP63058 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.75■■□□□ 1.07
ThraP63058 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ThraP63058 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ThraP63058 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ThraP63058 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ThraP63058 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ThraP63058 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ThraP63058 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ThraP63058 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.73■■□□□ 1.07
ThraP63058 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ThraP63058 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ThraP63058 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms