Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tpm1P58771 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Tpm1P58771 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Tpm1P58771 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tpm1P58771 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tpm1P58771 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.16■■□□□ 1.46
Tpm1P58771 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tpm1P58771 Notumos-201ENSMUST00000151998 2659 ntBASIC24.15■■□□□ 1.46
Tpm1P58771 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.15■■□□□ 1.46
Tpm1P58771 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Tpm1P58771 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tpm1P58771 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Tpm1P58771 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tpm1P58771 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Tpm1P58771 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.14■■□□□ 1.45
Tpm1P58771 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tpm1P58771 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Tpm1P58771 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tpm1P58771 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tpm1P58771 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tpm1P58771 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.13■■□□□ 1.45
Tpm1P58771 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tpm1P58771 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tpm1P58771 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.13■■□□□ 1.45
Tpm1P58771 Gm6821-201ENSMUST00000107540 542 ntBASIC24.12■■□□□ 1.45
Tpm1P58771 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tpm1P58771 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.11■■□□□ 1.45
Tpm1P58771 Gm32051-202ENSMUST00000197905 2385 ntBASIC24.11■■□□□ 1.45
Tpm1P58771 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Tpm1P58771 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tpm1P58771 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Tpm1P58771 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Tpm1P58771 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Tpm1P58771 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.09■■□□□ 1.45
Tpm1P58771 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Tpm1P58771 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Tpm1P58771 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC24.09■■□□□ 1.45
Tpm1P58771 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC24.09■■□□□ 1.45
Tpm1P58771 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Tpm1P58771 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tpm1P58771 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tpm1P58771 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tpm1P58771 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Tpm1P58771 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Tpm1P58771 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tpm1P58771 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Tpm1P58771 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Tpm1P58771 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Tpm1P58771 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tpm1P58771 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.05■■□□□ 1.44
Tpm1P58771 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.05■■□□□ 1.44
Tpm1P58771 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Tpm1P58771 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Tpm1P58771 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tpm1P58771 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tpm1P58771 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.04■■□□□ 1.44
Tpm1P58771 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tpm1P58771 Gm4799-201ENSMUST00000095396 657 ntBASIC24.04■■□□□ 1.44
Tpm1P58771 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tpm1P58771 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tpm1P58771 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC24.04■■□□□ 1.44
Tpm1P58771 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24.03■■□□□ 1.44
Tpm1P58771 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.03■■□□□ 1.44
Tpm1P58771 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tpm1P58771 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tpm1P58771 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Tpm1P58771 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tpm1P58771 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Tpm1P58771 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tpm1P58771 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Tpm1P58771 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Tpm1P58771 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Tpm1P58771 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.02■■□□□ 1.44
Tpm1P58771 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
Tpm1P58771 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tpm1P58771 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC24.01■■□□□ 1.43
Tpm1P58771 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24■■□□□ 1.43
Tpm1P58771 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24■■□□□ 1.43
Tpm1P58771 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tpm1P58771 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tpm1P58771 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
Tpm1P58771 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24■■□□□ 1.43
Tpm1P58771 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms