Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sssca1P56873 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.52■□□□□ 0.4
Sssca1P56873 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sssca1P56873 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Sssca1P56873 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.51■□□□□ 0.39
Sssca1P56873 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sssca1P56873 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sssca1P56873 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Sssca1P56873 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Sssca1P56873 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.5■□□□□ 0.39
Sssca1P56873 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Sssca1P56873 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.5■□□□□ 0.39
Sssca1P56873 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sssca1P56873 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Sssca1P56873 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.49■□□□□ 0.39
Sssca1P56873 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sssca1P56873 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sssca1P56873 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sssca1P56873 Gm8503-201ENSMUST00000118131 455 ntBASIC17.48■□□□□ 0.39
Sssca1P56873 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.48■□□□□ 0.39
Sssca1P56873 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.48■□□□□ 0.39
Sssca1P56873 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.47■□□□□ 0.39
Sssca1P56873 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sssca1P56873 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sssca1P56873 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sssca1P56873 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.47■□□□□ 0.39
Sssca1P56873 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sssca1P56873 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sssca1P56873 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sssca1P56873 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sssca1P56873 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sssca1P56873 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.46■□□□□ 0.39
Sssca1P56873 Gm22567-201ENSMUST00000175542 342 ntBASIC17.46■□□□□ 0.39
Sssca1P56873 Mir3960-201ENSMUST00000198213 73 ntBASIC17.46■□□□□ 0.39
Sssca1P56873 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sssca1P56873 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sssca1P56873 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sssca1P56873 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sssca1P56873 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Sssca1P56873 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.45■□□□□ 0.38
Sssca1P56873 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sssca1P56873 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sssca1P56873 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sssca1P56873 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sssca1P56873 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.45■□□□□ 0.38
Sssca1P56873 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sssca1P56873 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sssca1P56873 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.45■□□□□ 0.38
Sssca1P56873 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.44■□□□□ 0.38
Sssca1P56873 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sssca1P56873 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sssca1P56873 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sssca1P56873 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.44■□□□□ 0.38
Sssca1P56873 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sssca1P56873 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sssca1P56873 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Sssca1P56873 Terc-201ENSMUST00000082862 423 ntBASIC17.43■□□□□ 0.38
Sssca1P56873 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sssca1P56873 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sssca1P56873 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Sssca1P56873 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sssca1P56873 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sssca1P56873 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.41■□□□□ 0.38
Sssca1P56873 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.41■□□□□ 0.38
Sssca1P56873 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.41■□□□□ 0.38
Sssca1P56873 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sssca1P56873 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sssca1P56873 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.4■□□□□ 0.38
Sssca1P56873 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sssca1P56873 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms