Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Hmgcs2P54869 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgcs2P54869 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
Hmgcs2P54869 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgcs2P54869 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgcs2P54869 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgcs2P54869 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Hmgcs2P54869 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgcs2P54869 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgcs2P54869 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.57■■□□□ 1.52
Hmgcs2P54869 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgcs2P54869 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgcs2P54869 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgcs2P54869 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Hmgcs2P54869 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.54■■□□□ 1.52
Hmgcs2P54869 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgcs2P54869 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.53■■□□□ 1.52
Hmgcs2P54869 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Hmgcs2P54869 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC24.53■■□□□ 1.52
Hmgcs2P54869 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgcs2P54869 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.53■■□□□ 1.52
Hmgcs2P54869 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.53■■□□□ 1.52
Hmgcs2P54869 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Hmgcs2P54869 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Hmgcs2P54869 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC24.51■■□□□ 1.51
Hmgcs2P54869 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgcs2P54869 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcs2P54869 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcs2P54869 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcs2P54869 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcs2P54869 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgcs2P54869 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgcs2P54869 Nsd1-206ENSMUST00000224918 1001 ntBASIC24.49■■□□□ 1.51
Hmgcs2P54869 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgcs2P54869 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC24.48■■□□□ 1.51
Hmgcs2P54869 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Hmgcs2P54869 Gm40881-201ENSMUST00000223397 166 ntBASIC24.48■■□□□ 1.51
Hmgcs2P54869 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgcs2P54869 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgcs2P54869 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgcs2P54869 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.47■■□□□ 1.51
Hmgcs2P54869 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgcs2P54869 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC24.47■■□□□ 1.51
Hmgcs2P54869 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.46■■□□□ 1.51
Hmgcs2P54869 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgcs2P54869 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC24.45■■□□□ 1.51
Hmgcs2P54869 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgcs2P54869 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgcs2P54869 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.45■■□□□ 1.5
Hmgcs2P54869 Gm22238-201ENSMUST00000175222 88 ntBASIC24.45■■□□□ 1.5
Hmgcs2P54869 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC24.45■■□□□ 1.5
Hmgcs2P54869 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.45■■□□□ 1.5
Hmgcs2P54869 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Hmgcs2P54869 Gm11847-201ENSMUST00000125165 1119 ntBASIC24.44■■□□□ 1.5
Hmgcs2P54869 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC24.44■■□□□ 1.5
Hmgcs2P54869 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Hmgcs2P54869 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Hmgcs2P54869 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Hmgcs2P54869 Gm13241-201ENSMUST00000094493 780 ntBASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms