Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.38■■□□□ 1.01
Limk1P53668 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Limk1P53668 Gm22238-201ENSMUST00000175222 88 ntBASIC21.38■■□□□ 1.01
Limk1P53668 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.38■■□□□ 1.01
Limk1P53668 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Limk1P53668 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limk1P53668 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limk1P53668 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.37■■□□□ 1.01
Limk1P53668 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.37■■□□□ 1.01
Limk1P53668 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.37■■□□□ 1.01
Limk1P53668 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Limk1P53668 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Limk1P53668 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.37■■□□□ 1.01
Limk1P53668 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limk1P53668 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limk1P53668 Gm12922-201ENSMUST00000120626 809 ntBASIC21.36■■□□□ 1.01
Limk1P53668 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.36■■□□□ 1.01
Limk1P53668 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Limk1P53668 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limk1P53668 Gm12821-201ENSMUST00000120022 600 ntBASIC21.35■■□□□ 1.01
Limk1P53668 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limk1P53668 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Limk1P53668 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Limk1P53668 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.34■■□□□ 1.01
Limk1P53668 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Limk1P53668 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Limk1P53668 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Limk1P53668 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Limk1P53668 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Limk1P53668 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Limk1P53668 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Limk1P53668 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Limk1P53668 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.31■■□□□ 1
Limk1P53668 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.31■■□□□ 1
Limk1P53668 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Limk1P53668 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.3■■□□□ 1
Limk1P53668 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Limk1P53668 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Limk1P53668 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.29■■□□□ 1
Limk1P53668 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Limk1P53668 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.29■■□□□ 1
Limk1P53668 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.29■■□□□ 1
Limk1P53668 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.29■■□□□ 1
Limk1P53668 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.29■■□□□ 1
Limk1P53668 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Limk1P53668 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Limk1P53668 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.29■■□□□ 1
Limk1P53668 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Limk1P53668 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
Limk1P53668 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.28■■□□□ 1
Limk1P53668 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.28■■□□□ 1
Limk1P53668 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Limk1P53668 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.27■■□□□ 1
Limk1P53668 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Limk1P53668 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Limk1P53668 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Limk1P53668 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Limk1P53668 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Limk1P53668 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Limk1P53668 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Limk1P53668 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Limk1P53668 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.25■□□□□ 0.99
Limk1P53668 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.25■□□□□ 0.99
Limk1P53668 Gm40881-201ENSMUST00000223397 166 ntBASIC21.25■□□□□ 0.99
Limk1P53668 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Limk1P53668 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.24■□□□□ 0.99
Limk1P53668 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.24■□□□□ 0.99
Limk1P53668 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.24■□□□□ 0.99
Limk1P53668 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Limk1P53668 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Limk1P53668 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Limk1P53668 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.23■□□□□ 0.99
Limk1P53668 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.23■□□□□ 0.99
Limk1P53668 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Limk1P53668 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Limk1P53668 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Limk1P53668 Gm27454-201ENSMUST00000185090 204 ntBASIC21.21■□□□□ 0.99
Limk1P53668 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.21■□□□□ 0.99
Limk1P53668 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Limk1P53668 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Limk1P53668 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Limk1P53668 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms