Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pdx1P52946 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pdx1P52946 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pdx1P52946 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdx1P52946 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pdx1P52946 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.54■■□□□ 1.04
Pdx1P52946 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pdx1P52946 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Pdx1P52946 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.54■■□□□ 1.04
Pdx1P52946 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.54■■□□□ 1.04
Pdx1P52946 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pdx1P52946 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
Pdx1P52946 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.53■■□□□ 1.04
Pdx1P52946 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdx1P52946 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdx1P52946 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pdx1P52946 Gm22567-201ENSMUST00000175542 342 ntBASIC21.51■■□□□ 1.03
Pdx1P52946 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pdx1P52946 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pdx1P52946 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdx1P52946 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdx1P52946 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.5■■□□□ 1.03
Pdx1P52946 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdx1P52946 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.5■■□□□ 1.03
Pdx1P52946 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdx1P52946 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pdx1P52946 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pdx1P52946 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pdx1P52946 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pdx1P52946 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.49■■□□□ 1.03
Pdx1P52946 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdx1P52946 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pdx1P52946 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pdx1P52946 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pdx1P52946 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pdx1P52946 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdx1P52946 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdx1P52946 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdx1P52946 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdx1P52946 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pdx1P52946 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pdx1P52946 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pdx1P52946 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Pdx1P52946 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Pdx1P52946 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.46■■□□□ 1.03
Pdx1P52946 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdx1P52946 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pdx1P52946 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Pdx1P52946 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdx1P52946 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdx1P52946 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdx1P52946 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdx1P52946 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Pdx1P52946 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdx1P52946 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Pdx1P52946 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdx1P52946 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pdx1P52946 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.43■■□□□ 1.02
Pdx1P52946 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pdx1P52946 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pdx1P52946 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pdx1P52946 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pdx1P52946 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.41■■□□□ 1.02
Pdx1P52946 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pdx1P52946 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pdx1P52946 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms