Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rph3aP47708 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rph3aP47708 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rph3aP47708 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.89■□□□□ 0.93
Rph3aP47708 Cap2-205ENSMUST00000225824 1634 ntBASIC20.89■□□□□ 0.93
Rph3aP47708 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rph3aP47708 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rph3aP47708 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rph3aP47708 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rph3aP47708 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rph3aP47708 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.87■□□□□ 0.93
Rph3aP47708 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rph3aP47708 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rph3aP47708 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.86■□□□□ 0.93
Rph3aP47708 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rph3aP47708 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rph3aP47708 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rph3aP47708 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rph3aP47708 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rph3aP47708 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rph3aP47708 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rph3aP47708 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rph3aP47708 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rph3aP47708 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rph3aP47708 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rph3aP47708 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rph3aP47708 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Rph3aP47708 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.83■□□□□ 0.92
Rph3aP47708 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rph3aP47708 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Rph3aP47708 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.82■□□□□ 0.92
Rph3aP47708 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rph3aP47708 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rph3aP47708 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.81■□□□□ 0.92
Rph3aP47708 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.81■□□□□ 0.92
Rph3aP47708 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rph3aP47708 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rph3aP47708 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rph3aP47708 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rph3aP47708 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rph3aP47708 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rph3aP47708 Gm22567-201ENSMUST00000175542 342 ntBASIC20.8■□□□□ 0.92
Rph3aP47708 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rph3aP47708 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rph3aP47708 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rph3aP47708 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Rph3aP47708 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Gm10420-201ENSMUST00000121713 882 ntBASIC20.79■□□□□ 0.92
Rph3aP47708 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rph3aP47708 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.78■□□□□ 0.92
Rph3aP47708 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rph3aP47708 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rph3aP47708 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Rph3aP47708 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.78■□□□□ 0.92
Rph3aP47708 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rph3aP47708 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rph3aP47708 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rph3aP47708 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rph3aP47708 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms