Protein–RNA interactions for Protein: P34960

Mmp12, Macrophage metalloelastase, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp12P34960 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp12P34960 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp12P34960 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mmp12P34960 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp12P34960 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp12P34960 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp12P34960 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.68■□□□□ 0.9
Mmp12P34960 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mmp12P34960 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Mmp12P34960 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp12P34960 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.67■□□□□ 0.9
Mmp12P34960 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp12P34960 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mmp12P34960 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Mmp12P34960 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp12P34960 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp12P34960 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp12P34960 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
Mmp12P34960 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp12P34960 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mmp12P34960 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Mmp12P34960 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Mmp12P34960 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp12P34960 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.65■□□□□ 0.9
Mmp12P34960 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mmp12P34960 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Mmp12P34960 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Mmp12P34960 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp12P34960 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp12P34960 Gm14117-201ENSMUST00000122417 843 ntBASIC20.64■□□□□ 0.89
Mmp12P34960 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp12P34960 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Mmp12P34960 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mmp12P34960 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp12P34960 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp12P34960 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp12P34960 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mmp12P34960 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp12P34960 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp12P34960 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Mmp12P34960 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.61■□□□□ 0.89
Mmp12P34960 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp12P34960 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp12P34960 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.61■□□□□ 0.89
Mmp12P34960 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.61■□□□□ 0.89
Mmp12P34960 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.61■□□□□ 0.89
Mmp12P34960 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mmp12P34960 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mmp12P34960 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.6■□□□□ 0.89
Mmp12P34960 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp12P34960 Gm9959-201ENSMUST00000068277 390 ntBASIC20.6■□□□□ 0.89
Mmp12P34960 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Mmp12P34960 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp12P34960 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mmp12P34960 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Mmp12P34960 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Mmp12P34960 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp12P34960 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Mmp12P34960 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mmp12P34960 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Mmp12P34960 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp12P34960 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp12P34960 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Mmp12P34960 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Mmp12P34960 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Mmp12P34960 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Mmp12P34960 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Mmp12P34960 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp12P34960 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp12P34960 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.55■□□□□ 0.88
Mmp12P34960 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp12P34960 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Mmp12P34960 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.54■□□□□ 0.88
Mmp12P34960 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Mmp12P34960 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Mmp12P34960 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp12P34960 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.53■□□□□ 0.88
Mmp12P34960 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.53■□□□□ 0.88
Mmp12P34960 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp12P34960 Gm10232-201ENSMUST00000089221 720 ntBASIC20.53■□□□□ 0.88
Mmp12P34960 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Mmp12P34960 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.52■□□□□ 0.88
Mmp12P34960 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Mmp12P34960 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Mmp12P34960 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.52■□□□□ 0.88
Mmp12P34960 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms