Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp2P33434 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp2P33434 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp2P33434 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp2P33434 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mmp2P33434 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp2P33434 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Mmp2P33434 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp2P33434 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mmp2P33434 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp2P33434 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp2P33434 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp2P33434 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.22■□□□□ 0.83
Mmp2P33434 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp2P33434 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp2P33434 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mmp2P33434 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp2P33434 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp2P33434 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp2P33434 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Mmp2P33434 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.21■□□□□ 0.83
Mmp2P33434 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Mmp2P33434 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp2P33434 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp2P33434 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp2P33434 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp2P33434 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mmp2P33434 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp2P33434 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp2P33434 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp2P33434 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp2P33434 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp2P33434 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp2P33434 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp2P33434 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.18■□□□□ 0.82
Mmp2P33434 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp2P33434 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp2P33434 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp2P33434 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Mmp2P33434 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.16■□□□□ 0.82
Mmp2P33434 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp2P33434 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp2P33434 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp2P33434 Gm22567-201ENSMUST00000175542 342 ntBASIC20.16■□□□□ 0.82
Mmp2P33434 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp2P33434 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp2P33434 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.15■□□□□ 0.82
Mmp2P33434 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp2P33434 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp2P33434 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp2P33434 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.14■□□□□ 0.81
Mmp2P33434 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.14■□□□□ 0.81
Mmp2P33434 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Mmp2P33434 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp2P33434 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Mmp2P33434 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp2P33434 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.13■□□□□ 0.81
Mmp2P33434 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp2P33434 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Mmp2P33434 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp2P33434 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Mmp2P33434 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Mmp2P33434 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Mmp2P33434 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp2P33434 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp2P33434 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Mmp2P33434 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.11■□□□□ 0.81
Mmp2P33434 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.11■□□□□ 0.81
Mmp2P33434 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.11■□□□□ 0.81
Mmp2P33434 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp2P33434 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp2P33434 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp2P33434 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp2P33434 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp2P33434 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp2P33434 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms