Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc6a11P31650 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a11P31650 Mir3960-201ENSMUST00000198213 73 ntBASIC20.57■□□□□ 0.88
Slc6a11P31650 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Slc6a11P31650 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.57■□□□□ 0.88
Slc6a11P31650 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Slc6a11P31650 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a11P31650 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc6a11P31650 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.56■□□□□ 0.88
Slc6a11P31650 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a11P31650 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a11P31650 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Slc6a11P31650 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Slc6a11P31650 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.55■□□□□ 0.88
Slc6a11P31650 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a11P31650 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc6a11P31650 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a11P31650 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc6a11P31650 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a11P31650 Gm15039-201ENSMUST00000118914 875 ntBASIC20.54■□□□□ 0.88
Slc6a11P31650 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.54■□□□□ 0.88
Slc6a11P31650 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a11P31650 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a11P31650 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a11P31650 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc6a11P31650 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.53■□□□□ 0.88
Slc6a11P31650 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc6a11P31650 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a11P31650 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc6a11P31650 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Gm27502-201ENSMUST00000183495 199 ntBASIC20.52■□□□□ 0.88
Slc6a11P31650 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc6a11P31650 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a11P31650 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a11P31650 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a11P31650 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a11P31650 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc6a11P31650 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a11P31650 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a11P31650 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.5■□□□□ 0.87
Slc6a11P31650 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.5■□□□□ 0.87
Slc6a11P31650 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Slc6a11P31650 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a11P31650 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc6a11P31650 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slc6a11P31650 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Gm9812-201ENSMUST00000061934 968 ntBASIC20.49■□□□□ 0.87
Slc6a11P31650 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slc6a11P31650 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a11P31650 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a11P31650 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.48■□□□□ 0.87
Slc6a11P31650 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a11P31650 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a11P31650 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slc6a11P31650 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Gm45364-201ENSMUST00000210883 159 ntBASIC20.47■□□□□ 0.87
Slc6a11P31650 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc6a11P31650 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.47■□□□□ 0.87
Slc6a11P31650 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Slc6a11P31650 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a11P31650 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Slc6a11P31650 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Slc6a11P31650 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a11P31650 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.46■□□□□ 0.87
Slc6a11P31650 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.46■□□□□ 0.87
Slc6a11P31650 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Slc6a11P31650 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a11P31650 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a11P31650 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc6a11P31650 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.45■□□□□ 0.86
Slc6a11P31650 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.45■□□□□ 0.86
Slc6a11P31650 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Slc6a11P31650 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc6a11P31650 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc6a11P31650 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms