Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TP20293 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TP20293 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TP20293 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TP20293 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.34■□□□□ 0.85
TP20293 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TP20293 Gm7332-201ENSMUST00000118351 454 ntBASIC20.34■□□□□ 0.85
TP20293 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TP20293 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TP20293 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TP20293 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TP20293 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
TP20293 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TP20293 Cap2-205ENSMUST00000225824 1634 ntBASIC20.32■□□□□ 0.84
TP20293 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TP20293 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TP20293 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TP20293 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TP20293 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TP20293 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TP20293 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TP20293 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TP20293 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
TP20293 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TP20293 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TP20293 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TP20293 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.3■□□□□ 0.84
TP20293 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.3■□□□□ 0.84
TP20293 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TP20293 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TP20293 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TP20293 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TP20293 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TP20293 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.28■□□□□ 0.84
TP20293 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TP20293 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.27■□□□□ 0.84
TP20293 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TP20293 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP20293 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TP20293 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TP20293 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP20293 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP20293 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP20293 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TP20293 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP20293 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TP20293 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TP20293 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP20293 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP20293 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP20293 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.25■□□□□ 0.83
TP20293 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TP20293 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP20293 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP20293 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
TP20293 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP20293 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TP20293 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.24■□□□□ 0.83
TP20293 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.23■□□□□ 0.83
TP20293 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TP20293 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.23■□□□□ 0.83
TP20293 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TP20293 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
TP20293 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.22■□□□□ 0.83
TP20293 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.22■□□□□ 0.83
TP20293 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TP20293 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.21■□□□□ 0.83
TP20293 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TP20293 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TP20293 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TP20293 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TP20293 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TP20293 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TP20293 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TP20293 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.2■□□□□ 0.82
TP20293 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TP20293 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TP20293 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TP20293 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.19■□□□□ 0.82
TP20293 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TP20293 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TP20293 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TP20293 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms