Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
Hmgn1P18608 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.93■□□□□ 0.78
Hmgn1P18608 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgn1P18608 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.92■□□□□ 0.78
Hmgn1P18608 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Hmgn1P18608 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgn1P18608 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Hmgn1P18608 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Hmgn1P18608 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Hmgn1P18608 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn1P18608 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn1P18608 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn1P18608 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn1P18608 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgn1P18608 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn1P18608 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn1P18608 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn1P18608 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgn1P18608 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hmgn1P18608 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hmgn1P18608 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmgn1P18608 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgn1P18608 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn1P18608 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hmgn1P18608 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn1P18608 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn1P18608 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.88■□□□□ 0.77
Hmgn1P18608 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgn1P18608 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.87■□□□□ 0.77
Hmgn1P18608 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.87■□□□□ 0.77
Hmgn1P18608 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgn1P18608 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.87■□□□□ 0.77
Hmgn1P18608 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.87■□□□□ 0.77
Hmgn1P18608 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.87■□□□□ 0.77
Hmgn1P18608 Terc-201ENSMUST00000082862 423 ntBASIC19.86■□□□□ 0.77
Hmgn1P18608 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.86■□□□□ 0.77
Hmgn1P18608 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn1P18608 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgn1P18608 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgn1P18608 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.85■□□□□ 0.77
Hmgn1P18608 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.85■□□□□ 0.77
Hmgn1P18608 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.85■□□□□ 0.77
Hmgn1P18608 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hmgn1P18608 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Hmgn1P18608 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.84■□□□□ 0.77
Hmgn1P18608 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.84■□□□□ 0.77
Hmgn1P18608 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Mir3960-201ENSMUST00000198213 73 ntBASIC19.84■□□□□ 0.77
Hmgn1P18608 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgn1P18608 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgn1P18608 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgn1P18608 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Hmgn1P18608 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.82■□□□□ 0.76
Hmgn1P18608 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn1P18608 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Hmgn1P18608 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn1P18608 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.82■□□□□ 0.76
Hmgn1P18608 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.82■□□□□ 0.76
Hmgn1P18608 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn1P18608 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgn1P18608 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hmgn1P18608 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn1P18608 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn1P18608 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgn1P18608 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hmgn1P18608 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
Hmgn1P18608 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn1P18608 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Hmgn1P18608 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn1P18608 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgn1P18608 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn1P18608 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.79■□□□□ 0.76
Hmgn1P18608 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn1P18608 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn1P18608 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgn1P18608 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Hmgn1P18608 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms