Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.42■□□□□ 0.7
P06344 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
P06344 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
P06344 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.41■□□□□ 0.7
P06344 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
P06344 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06344 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P06344 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06344 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06344 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.4■□□□□ 0.7
P06344 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.4■□□□□ 0.7
P06344 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06344 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
P06344 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06344 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06344 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P06344 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.39■□□□□ 0.69
P06344 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06344 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06344 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.39■□□□□ 0.69
P06344 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.38■□□□□ 0.69
P06344 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.38■□□□□ 0.69
P06344 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.38■□□□□ 0.69
P06344 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P06344 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06344 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06344 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P06344 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
P06344 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P06344 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P06344 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06344 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06344 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P06344 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P06344 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.36■□□□□ 0.69
P06344 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
P06344 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06344 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.36■□□□□ 0.69
P06344 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06344 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P06344 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P06344 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P06344 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P06344 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
P06344 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.35■□□□□ 0.69
P06344 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
P06344 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.35■□□□□ 0.69
P06344 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
P06344 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P06344 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
P06344 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.34■□□□□ 0.69
P06344 Gm45444-201ENSMUST00000211394 898 ntBASIC19.34■□□□□ 0.69
P06344 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
P06344 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
P06344 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P06344 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
P06344 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
P06344 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
P06344 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
P06344 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
P06344 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06344 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.32■□□□□ 0.68
P06344 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
P06344 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06344 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
P06344 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Gm13238-201ENSMUST00000117655 780 ntBASIC19.31■□□□□ 0.68
P06344 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
P06344 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
P06344 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
P06344 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.3■□□□□ 0.68
P06344 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P06344 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
P06344 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
P06344 Gm43566-201ENSMUST00000196851 808 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms