Protein–RNA interactions for Protein: P04945

Ig kappa chain V-VI region NQ2-6.1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04945 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.78■□□□□ 0.6
P04945 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04945 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04945 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04945 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
P04945 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04945 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P04945 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04945 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04945 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04945 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P04945 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04945 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04945 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P04945 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04945 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04945 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.76■□□□□ 0.59
P04945 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
P04945 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04945 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04945 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04945 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04945 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.75■□□□□ 0.59
P04945 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.75■□□□□ 0.59
P04945 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P04945 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04945 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04945 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04945 Gm11175-201ENSMUST00000116172 543 ntBASIC18.73■□□□□ 0.59
P04945 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04945 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04945 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.71■□□□□ 0.59
P04945 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
P04945 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.71■□□□□ 0.59
P04945 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.71■□□□□ 0.59
P04945 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.71■□□□□ 0.59
P04945 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04945 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04945 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P04945 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.7■□□□□ 0.58
P04945 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
P04945 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04945 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
P04945 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04945 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
P04945 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04945 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04945 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
P04945 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04945 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P04945 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.68■□□□□ 0.58
P04945 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04945 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04945 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.67■□□□□ 0.58
P04945 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.67■□□□□ 0.58
P04945 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04945 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.66■□□□□ 0.58
P04945 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.66■□□□□ 0.58
P04945 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
P04945 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.66■□□□□ 0.58
P04945 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
P04945 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
P04945 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
P04945 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P04945 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
P04945 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P04945 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.65■□□□□ 0.58
P04945 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms