Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
P01852 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P01852 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
P01852 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.86■□□□□ 0.77
P01852 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P01852 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01852 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01852 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
P01852 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.84■□□□□ 0.77
P01852 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01852 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
P01852 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P01852 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
P01852 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01852 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
P01852 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
P01852 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P01852 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P01852 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P01852 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
P01852 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P01852 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P01852 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P01852 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.81■□□□□ 0.76
P01852 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
P01852 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.81■□□□□ 0.76
P01852 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P01852 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.81■□□□□ 0.76
P01852 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P01852 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P01852 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P01852 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.8■□□□□ 0.76
P01852 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
P01852 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P01852 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P01852 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.79■□□□□ 0.76
P01852 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.79■□□□□ 0.76
P01852 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P01852 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P01852 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P01852 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.79■□□□□ 0.76
P01852 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P01852 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P01852 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.78■□□□□ 0.76
P01852 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.78■□□□□ 0.76
P01852 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
P01852 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.77■□□□□ 0.76
P01852 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
P01852 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01852 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.77■□□□□ 0.76
P01852 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01852 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01852 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01852 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
P01852 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01852 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
P01852 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
P01852 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
P01852 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P01852 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P01852 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
P01852 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.74■□□□□ 0.75
P01852 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Gm5921-201ENSMUST00000075898 882 ntBASIC19.74■□□□□ 0.75
P01852 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01852 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
P01852 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P01852 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
P01852 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
P01852 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.73■□□□□ 0.75
P01852 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
P01852 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01852 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P01852 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P01852 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms