Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igh-VJ558P01758 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igh-VJ558P01758 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Igh-VJ558P01758 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igh-VJ558P01758 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igh-VJ558P01758 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.92■□□□□ 0.62
Igh-VJ558P01758 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.91■□□□□ 0.62
Igh-VJ558P01758 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Igh-VJ558P01758 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Igh-VJ558P01758 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Igh-VJ558P01758 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Igh-VJ558P01758 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Gm27502-201ENSMUST00000183495 199 ntBASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igh-VJ558P01758 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igh-VJ558P01758 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.87■□□□□ 0.61
Igh-VJ558P01758 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igh-VJ558P01758 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igh-VJ558P01758 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igh-VJ558P01758 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igh-VJ558P01758 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.86■□□□□ 0.61
Igh-VJ558P01758 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Gm14523-201ENSMUST00000117260 558 ntBASIC18.85■□□□□ 0.61
Igh-VJ558P01758 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Igh-VJ558P01758 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Igh-VJ558P01758 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Igh-VJ558P01758 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igh-VJ558P01758 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Igh-VJ558P01758 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Igh-VJ558P01758 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Igh-VJ558P01758 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Igh-VJ558P01758 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.83■□□□□ 0.6
Igh-VJ558P01758 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igh-VJ558P01758 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Igh-VJ558P01758 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Igh-VJ558P01758 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms