Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.34■□□□□ 0.37
P01727 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
P01727 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01727 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01727 Gm14117-201ENSMUST00000122417 843 ntBASIC17.33■□□□□ 0.36
P01727 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01727 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.32■□□□□ 0.36
P01727 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.32■□□□□ 0.36
P01727 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01727 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01727 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
P01727 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.31■□□□□ 0.36
P01727 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01727 Gm9959-201ENSMUST00000068277 390 ntBASIC17.31■□□□□ 0.36
P01727 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01727 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01727 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01727 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01727 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01727 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
P01727 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01727 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01727 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.3■□□□□ 0.36
P01727 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01727 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.29■□□□□ 0.36
P01727 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01727 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
P01727 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.28■□□□□ 0.36
P01727 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01727 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
P01727 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
P01727 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01727 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P01727 Gm15039-201ENSMUST00000118914 875 ntBASIC17.27■□□□□ 0.36
P01727 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.27■□□□□ 0.36
P01727 Etf1-202ENSMUST00000180351 108 ntBASIC17.27■□□□□ 0.36
P01727 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.27■□□□□ 0.36
P01727 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
P01727 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P01727 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
P01727 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01727 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01727 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P01727 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
P01727 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01727 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P01727 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P01727 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
P01727 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P01727 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01727 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.24■□□□□ 0.35
P01727 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.24■□□□□ 0.35
P01727 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.24■□□□□ 0.35
P01727 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
P01727 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01727 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P01727 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.23■□□□□ 0.35
P01727 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.23■□□□□ 0.35
P01727 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.23■□□□□ 0.35
P01727 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
P01727 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01727 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
P01727 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01727 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
P01727 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.22■□□□□ 0.35
P01727 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.22■□□□□ 0.35
P01727 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P01727 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01727 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.21■□□□□ 0.35
P01727 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
P01727 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01727 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01727 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P01727 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
P01727 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01727 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P01727 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P01727 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.2■□□□□ 0.34
P01727 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P01727 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms