Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sh2d1aO88890 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.29■□□□□ 0.04
Sh2d1aO88890 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sh2d1aO88890 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1aO88890 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Sh2d1aO88890 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1aO88890 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1aO88890 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Sh2d1aO88890 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1aO88890 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Sh2d1aO88890 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Sh2d1aO88890 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Gm11687-201ENSMUST00000118911 886 ntBASIC15.26■□□□□ 0.03
Sh2d1aO88890 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sh2d1aO88890 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Gm5987-201ENSMUST00000196433 1151 ntBASIC15.25■□□□□ 0.03
Sh2d1aO88890 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sh2d1aO88890 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sh2d1aO88890 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d1aO88890 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d1aO88890 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.23■□□□□ 0.03
Sh2d1aO88890 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d1aO88890 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sh2d1aO88890 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sh2d1aO88890 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sh2d1aO88890 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sh2d1aO88890 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sh2d1aO88890 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d1aO88890 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.2■□□□□ 0.02
Sh2d1aO88890 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh2d1aO88890 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d1aO88890 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sh2d1aO88890 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh2d1aO88890 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sh2d1aO88890 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d1aO88890 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d1aO88890 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.19■□□□□ 0.02
Sh2d1aO88890 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d1aO88890 Gm6277-202ENSMUST00000224036 2779 ntBASIC15.19■□□□□ 0.02
Sh2d1aO88890 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2d1aO88890 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh2d1aO88890 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d1aO88890 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d1aO88890 Gm44428-201ENSMUST00000204474 874 ntBASIC15.18■□□□□ 0.02
Sh2d1aO88890 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d1aO88890 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.18■□□□□ 0.02
Sh2d1aO88890 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d1aO88890 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms