Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Hcn3O88705 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn3O88705 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Hcn3O88705 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Hcn3O88705 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn3O88705 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Hcn3O88705 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.77■□□□□ 0.92
Hcn3O88705 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn3O88705 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Hcn3O88705 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn3O88705 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
Hcn3O88705 Gm7432-201ENSMUST00000210343 879 ntBASIC20.76■□□□□ 0.91
Hcn3O88705 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn3O88705 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn3O88705 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn3O88705 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Hcn3O88705 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn3O88705 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Hcn3O88705 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn3O88705 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Hcn3O88705 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn3O88705 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.75■□□□□ 0.91
Hcn3O88705 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn3O88705 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.75■□□□□ 0.91
Hcn3O88705 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Hcn3O88705 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn3O88705 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn3O88705 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Hcn3O88705 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
Hcn3O88705 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.74■□□□□ 0.91
Hcn3O88705 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.74■□□□□ 0.91
Hcn3O88705 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcn3O88705 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hcn3O88705 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.73■□□□□ 0.91
Hcn3O88705 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hcn3O88705 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.73■□□□□ 0.91
Hcn3O88705 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.72■□□□□ 0.91
Hcn3O88705 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hcn3O88705 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hcn3O88705 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hcn3O88705 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn3O88705 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Hcn3O88705 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn3O88705 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hcn3O88705 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.7■□□□□ 0.9
Hcn3O88705 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hcn3O88705 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn3O88705 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn3O88705 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn3O88705 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.68■□□□□ 0.9
Hcn3O88705 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.68■□□□□ 0.9
Hcn3O88705 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn3O88705 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hcn3O88705 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hcn3O88705 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn3O88705 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn3O88705 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Hcn3O88705 Gm11599-201ENSMUST00000118720 878 ntBASIC20.66■□□□□ 0.9
Hcn3O88705 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn3O88705 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn3O88705 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hcn3O88705 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hcn3O88705 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hcn3O88705 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn3O88705 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.64■□□□□ 0.89
Hcn3O88705 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Hcn3O88705 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn3O88705 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hcn3O88705 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hcn3O88705 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Hcn3O88705 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hcn3O88705 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hcn3O88705 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms