Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.59■□□□□ 0.89
Rdh5O55240 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh5O55240 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh5O55240 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh5O55240 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh5O55240 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh5O55240 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rdh5O55240 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.57■□□□□ 0.88
Rdh5O55240 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Gm22567-201ENSMUST00000175542 342 ntBASIC20.57■□□□□ 0.88
Rdh5O55240 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh5O55240 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh5O55240 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh5O55240 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rdh5O55240 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh5O55240 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh5O55240 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh5O55240 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.55■□□□□ 0.88
Rdh5O55240 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rdh5O55240 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Gm14523-201ENSMUST00000117260 558 ntBASIC20.55■□□□□ 0.88
Rdh5O55240 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.55■□□□□ 0.88
Rdh5O55240 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rdh5O55240 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.54■□□□□ 0.88
Rdh5O55240 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh5O55240 Gm7332-201ENSMUST00000118351 454 ntBASIC20.54■□□□□ 0.88
Rdh5O55240 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rdh5O55240 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh5O55240 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rdh5O55240 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh5O55240 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Rdh5O55240 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rdh5O55240 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rdh5O55240 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh5O55240 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rdh5O55240 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rdh5O55240 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.52■□□□□ 0.88
Rdh5O55240 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Rdh5O55240 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rdh5O55240 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rdh5O55240 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.5■□□□□ 0.87
Rdh5O55240 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rdh5O55240 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.5■□□□□ 0.87
Rdh5O55240 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.5■□□□□ 0.87
Rdh5O55240 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.5■□□□□ 0.87
Rdh5O55240 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rdh5O55240 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh5O55240 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh5O55240 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh5O55240 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.49■□□□□ 0.87
Rdh5O55240 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh5O55240 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rdh5O55240 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh5O55240 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.48■□□□□ 0.87
Rdh5O55240 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.48■□□□□ 0.87
Rdh5O55240 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rdh5O55240 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rdh5O55240 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.47■□□□□ 0.87
Rdh5O55240 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.47■□□□□ 0.87
Rdh5O55240 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rdh5O55240 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rdh5O55240 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms