Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm2O35900 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lsm2O35900 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Lsm2O35900 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.42■□□□□ 0.7
Lsm2O35900 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lsm2O35900 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.41■□□□□ 0.7
Lsm2O35900 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm2O35900 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm2O35900 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm2O35900 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm2O35900 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lsm2O35900 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.41■□□□□ 0.7
Lsm2O35900 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lsm2O35900 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm2O35900 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Lsm2O35900 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.4■□□□□ 0.7
Lsm2O35900 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm2O35900 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Lsm2O35900 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm2O35900 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm2O35900 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lsm2O35900 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Lsm2O35900 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Lsm2O35900 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.39■□□□□ 0.69
Lsm2O35900 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Lsm2O35900 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lsm2O35900 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lsm2O35900 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lsm2O35900 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Lsm2O35900 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm2O35900 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lsm2O35900 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.37■□□□□ 0.69
Lsm2O35900 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lsm2O35900 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm2O35900 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lsm2O35900 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm2O35900 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lsm2O35900 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Lsm2O35900 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm2O35900 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm2O35900 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm2O35900 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lsm2O35900 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm2O35900 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm2O35900 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm2O35900 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.34■□□□□ 0.69
Lsm2O35900 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm2O35900 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.34■□□□□ 0.69
Lsm2O35900 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm2O35900 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Lsm2O35900 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm2O35900 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm2O35900 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.32■□□□□ 0.68
Lsm2O35900 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm2O35900 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.32■□□□□ 0.68
Lsm2O35900 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm2O35900 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm2O35900 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm2O35900 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.32■□□□□ 0.68
Lsm2O35900 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lsm2O35900 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Lsm2O35900 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm2O35900 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lsm2O35900 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm2O35900 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.31■□□□□ 0.68
Lsm2O35900 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm2O35900 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.31■□□□□ 0.68
Lsm2O35900 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
Lsm2O35900 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm2O35900 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.3■□□□□ 0.68
Lsm2O35900 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm2O35900 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Lsm2O35900 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
Lsm2O35900 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm2O35900 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.29■□□□□ 0.68
Lsm2O35900 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm2O35900 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lsm2O35900 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm2O35900 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms