Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.74■□□□□ 0.75
Matn3O35701 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.74■□□□□ 0.75
Matn3O35701 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Matn3O35701 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn3O35701 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Matn3O35701 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Matn3O35701 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.73■□□□□ 0.75
Matn3O35701 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Matn3O35701 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn3O35701 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.72■□□□□ 0.75
Matn3O35701 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.72■□□□□ 0.75
Matn3O35701 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn3O35701 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Matn3O35701 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn3O35701 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Matn3O35701 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Matn3O35701 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.71■□□□□ 0.75
Matn3O35701 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Matn3O35701 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.71■□□□□ 0.75
Matn3O35701 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Matn3O35701 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn3O35701 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.69■□□□□ 0.74
Matn3O35701 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.69■□□□□ 0.74
Matn3O35701 Gm8503-201ENSMUST00000118131 455 ntBASIC19.69■□□□□ 0.74
Matn3O35701 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn3O35701 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn3O35701 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn3O35701 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Matn3O35701 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Matn3O35701 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Matn3O35701 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Matn3O35701 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Matn3O35701 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Matn3O35701 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Matn3O35701 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Matn3O35701 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.67■□□□□ 0.74
Matn3O35701 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Matn3O35701 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Matn3O35701 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Matn3O35701 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.66■□□□□ 0.74
Matn3O35701 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Matn3O35701 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Matn3O35701 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.66■□□□□ 0.74
Matn3O35701 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Matn3O35701 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Matn3O35701 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Matn3O35701 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Matn3O35701 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Matn3O35701 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Matn3O35701 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Matn3O35701 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Matn3O35701 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Matn3O35701 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Matn3O35701 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Matn3O35701 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Matn3O35701 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
Matn3O35701 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Matn3O35701 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Matn3O35701 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Matn3O35701 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Matn3O35701 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Matn3O35701 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Matn3O35701 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Matn3O35701 Gm6821-201ENSMUST00000107540 542 ntBASIC19.61■□□□□ 0.73
Matn3O35701 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Matn3O35701 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Matn3O35701 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Matn3O35701 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.6■□□□□ 0.73
Matn3O35701 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.6■□□□□ 0.73
Matn3O35701 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Matn3O35701 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Matn3O35701 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Matn3O35701 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Matn3O35701 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Matn3O35701 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.59■□□□□ 0.73
Matn3O35701 Gm37136-201ENSMUST00000194368 194 ntBASIC19.59■□□□□ 0.73
Matn3O35701 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Matn3O35701 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Matn3O35701 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Matn3O35701 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Matn3O35701 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Matn3O35701 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Matn3O35701 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Matn3O35701 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Matn3O35701 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms