Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.37■■□□□ 1.17
Ptch2O35595 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch2O35595 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch2O35595 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch2O35595 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ptch2O35595 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch2O35595 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ptch2O35595 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch2O35595 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch2O35595 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.36■■□□□ 1.17
Ptch2O35595 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Ptch2O35595 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ptch2O35595 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch2O35595 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch2O35595 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.35■■□□□ 1.17
Ptch2O35595 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.35■■□□□ 1.17
Ptch2O35595 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Ptch2O35595 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Ptch2O35595 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ptch2O35595 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ptch2O35595 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ptch2O35595 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch2O35595 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.34■■□□□ 1.17
Ptch2O35595 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ptch2O35595 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Ptch2O35595 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
Ptch2O35595 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch2O35595 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Ptch2O35595 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch2O35595 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Ptch2O35595 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch2O35595 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ptch2O35595 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ptch2O35595 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ptch2O35595 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ptch2O35595 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch2O35595 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch2O35595 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.31■■□□□ 1.16
Ptch2O35595 Etf1-202ENSMUST00000180351 108 ntBASIC22.31■■□□□ 1.16
Ptch2O35595 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ptch2O35595 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch2O35595 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch2O35595 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch2O35595 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ptch2O35595 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch2O35595 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.29■■□□□ 1.16
Ptch2O35595 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ptch2O35595 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ptch2O35595 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch2O35595 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch2O35595 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch2O35595 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch2O35595 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Ptch2O35595 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ptch2O35595 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.26■■□□□ 1.15
Ptch2O35595 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch2O35595 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch2O35595 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.26■■□□□ 1.15
Ptch2O35595 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.26■■□□□ 1.15
Ptch2O35595 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
Ptch2O35595 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ptch2O35595 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Ptch2O35595 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ptch2O35595 AC117245.4-201ENSMUST00000217388 1646 ntBASIC22.24■■□□□ 1.15
Ptch2O35595 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch2O35595 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.24■■□□□ 1.15
Ptch2O35595 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.24■■□□□ 1.15
Ptch2O35595 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.24■■□□□ 1.15
Ptch2O35595 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch2O35595 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.24■■□□□ 1.15
Ptch2O35595 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch2O35595 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch2O35595 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ptch2O35595 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch2O35595 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch2O35595 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ptch2O35595 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Ptch2O35595 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.23■■□□□ 1.15
Ptch2O35595 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.23■■□□□ 1.15
Ptch2O35595 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.23■■□□□ 1.15
Ptch2O35595 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC22.23■■□□□ 1.15
Ptch2O35595 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch2O35595 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.22■■□□□ 1.15
Ptch2O35595 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ptch2O35595 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch2O35595 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.21■■□□□ 1.15
Ptch2O35595 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.21■■□□□ 1.15
Ptch2O35595 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ptch2O35595 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms