Protein–RNA interactions for Protein: O08792

Ebf2, Transcription factor COE2, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf2O08792 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.33■■□□□ 1.17
Ebf2O08792 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.33■■□□□ 1.17
Ebf2O08792 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ebf2O08792 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC22.33■■□□□ 1.16
Ebf2O08792 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ebf2O08792 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Ebf2O08792 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Ebf2O08792 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ebf2O08792 Gm5921-201ENSMUST00000075898 882 ntBASIC22.31■■□□□ 1.16
Ebf2O08792 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ebf2O08792 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.3■■□□□ 1.16
Ebf2O08792 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ebf2O08792 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ebf2O08792 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Ebf2O08792 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.3■■□□□ 1.16
Ebf2O08792 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ebf2O08792 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Ebf2O08792 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ebf2O08792 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.3■■□□□ 1.16
Ebf2O08792 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Ebf2O08792 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.29■■□□□ 1.16
Ebf2O08792 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.29■■□□□ 1.16
Ebf2O08792 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ebf2O08792 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ebf2O08792 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ebf2O08792 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Ebf2O08792 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ebf2O08792 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ebf2O08792 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ebf2O08792 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ebf2O08792 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ebf2O08792 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Ebf2O08792 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ebf2O08792 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ebf2O08792 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ebf2O08792 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ebf2O08792 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ebf2O08792 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ebf2O08792 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.25■■□□□ 1.15
Ebf2O08792 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Ebf2O08792 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.24■■□□□ 1.15
Ebf2O08792 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ebf2O08792 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ebf2O08792 Gm5812-201ENSMUST00000061073 957 ntBASIC22.24■■□□□ 1.15
Ebf2O08792 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.23■■□□□ 1.15
Ebf2O08792 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ebf2O08792 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ebf2O08792 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.23■■□□□ 1.15
Ebf2O08792 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ebf2O08792 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ebf2O08792 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ebf2O08792 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ebf2O08792 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ebf2O08792 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ebf2O08792 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ebf2O08792 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ebf2O08792 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ebf2O08792 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ebf2O08792 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ebf2O08792 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ebf2O08792 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
Ebf2O08792 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ebf2O08792 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Ebf2O08792 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ebf2O08792 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ebf2O08792 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ebf2O08792 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ebf2O08792 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.2■■□□□ 1.14
Ebf2O08792 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
Ebf2O08792 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ebf2O08792 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ebf2O08792 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ebf2O08792 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.19■■□□□ 1.14
Ebf2O08792 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ebf2O08792 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ebf2O08792 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ebf2O08792 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.19■■□□□ 1.14
Ebf2O08792 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ebf2O08792 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ebf2O08792 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
Ebf2O08792 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ebf2O08792 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ebf2O08792 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ebf2O08792 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ebf2O08792 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ebf2O08792 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ebf2O08792 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ebf2O08792 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ebf2O08792 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Ebf2O08792 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ebf2O08792 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ebf2O08792 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.15■■□□□ 1.14
Ebf2O08792 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ebf2O08792 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.15■■□□□ 1.14
Ebf2O08792 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ebf2O08792 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ebf2O08792 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Ebf2O08792 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.14■■□□□ 1.13
Ebf2O08792 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Ebf2O08792 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms