Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3yl1O08641 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3yl1O08641 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3yl1O08641 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3yl1O08641 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3yl1O08641 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3yl1O08641 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3yl1O08641 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.63■□□□□ 0.89
Sh3yl1O08641 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.63■□□□□ 0.89
Sh3yl1O08641 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3yl1O08641 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Gm10420-201ENSMUST00000121713 882 ntBASIC20.62■□□□□ 0.89
Sh3yl1O08641 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3yl1O08641 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.61■□□□□ 0.89
Sh3yl1O08641 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3yl1O08641 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3yl1O08641 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sh3yl1O08641 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3yl1O08641 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.6■□□□□ 0.89
Sh3yl1O08641 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3yl1O08641 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3yl1O08641 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3yl1O08641 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3yl1O08641 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3yl1O08641 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.58■□□□□ 0.89
Sh3yl1O08641 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3yl1O08641 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.58■□□□□ 0.89
Sh3yl1O08641 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3yl1O08641 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sh3yl1O08641 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.57■□□□□ 0.88
Sh3yl1O08641 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh3yl1O08641 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3yl1O08641 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.56■□□□□ 0.88
Sh3yl1O08641 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3yl1O08641 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.55■□□□□ 0.88
Sh3yl1O08641 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3yl1O08641 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3yl1O08641 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3yl1O08641 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3yl1O08641 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3yl1O08641 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Sh3yl1O08641 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sh3yl1O08641 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3yl1O08641 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3yl1O08641 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3yl1O08641 Notumos-201ENSMUST00000151998 2659 ntBASIC20.52■□□□□ 0.88
Sh3yl1O08641 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.52■□□□□ 0.88
Sh3yl1O08641 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.52■□□□□ 0.88
Sh3yl1O08641 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3yl1O08641 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Sh3yl1O08641 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3yl1O08641 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms