Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm10553J3QPF1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Gm10553J3QPF1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.62■□□□□ 0.25
Gm10553J3QPF1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm10553J3QPF1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Gm10553J3QPF1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Gm28731-201ENSMUST00000185564 1569 ntBASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Gm10553J3QPF1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm10553J3QPF1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm10553J3QPF1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Gm10553J3QPF1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.6■□□□□ 0.25
Gm10553J3QPF1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm10553J3QPF1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm10553J3QPF1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Gm10553J3QPF1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10553J3QPF1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10553J3QPF1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10553J3QPF1 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.58■□□□□ 0.24
Gm10553J3QPF1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Gm10553J3QPF1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm10553J3QPF1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm10553J3QPF1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm10553J3QPF1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Gm10553J3QPF1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm10553J3QPF1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm10553J3QPF1 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.56■□□□□ 0.24
Gm10553J3QPF1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Gm5921-201ENSMUST00000075898 882 ntBASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Gm10553J3QPF1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm10553J3QPF1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm10553J3QPF1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm10553J3QPF1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm10553J3QPF1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm10553J3QPF1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm10553J3QPF1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.51■□□□□ 0.23
Gm10553J3QPF1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm10553J3QPF1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm10553J3QPF1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms