Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Zc3h13E9Q784 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Zc3h13E9Q784 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.06■■■□□ 2.56
Zc3h13E9Q784 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Zc3h13E9Q784 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Zc3h13E9Q784 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Zc3h13E9Q784 Nsd1-206ENSMUST00000224918 1001 ntBASIC31.05■■■□□ 2.56
Zc3h13E9Q784 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Zc3h13E9Q784 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
Zc3h13E9Q784 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Zc3h13E9Q784 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.04■■■□□ 2.56
Zc3h13E9Q784 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Zc3h13E9Q784 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Zc3h13E9Q784 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Zc3h13E9Q784 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Zc3h13E9Q784 AC122428.3-201ENSMUST00000215551 2290 ntBASIC31.03■■■□□ 2.56
Zc3h13E9Q784 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.03■■■□□ 2.56
Zc3h13E9Q784 Gm18284-201ENSMUST00000172604 624 ntBASIC31.02■■■□□ 2.56
Zc3h13E9Q784 Gm8495-201ENSMUST00000188740 694 ntBASIC31.02■■■□□ 2.56
Zc3h13E9Q784 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
Zc3h13E9Q784 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Zc3h13E9Q784 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Zc3h13E9Q784 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31■■■□□ 2.55
Zc3h13E9Q784 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Zc3h13E9Q784 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31■■■□□ 2.55
Zc3h13E9Q784 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Zc3h13E9Q784 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Zc3h13E9Q784 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Zc3h13E9Q784 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Gm28536-201ENSMUST00000190971 1317 ntBASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC30.98■■■□□ 2.55
Zc3h13E9Q784 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Zc3h13E9Q784 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Zc3h13E9Q784 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC30.96■■■□□ 2.55
Zc3h13E9Q784 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC30.95■■■□□ 2.55
Zc3h13E9Q784 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC30.95■■■□□ 2.55
Zc3h13E9Q784 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Zc3h13E9Q784 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
Zc3h13E9Q784 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Zc3h13E9Q784 Gm29257-201ENSMUST00000186115 639 ntBASIC30.95■■■□□ 2.54
Zc3h13E9Q784 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Zc3h13E9Q784 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
Zc3h13E9Q784 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Zc3h13E9Q784 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC30.94■■■□□ 2.54
Zc3h13E9Q784 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.94■■■□□ 2.54
Zc3h13E9Q784 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Gm40881-201ENSMUST00000223397 166 ntBASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
Zc3h13E9Q784 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Zc3h13E9Q784 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC30.92■■■□□ 2.54
Zc3h13E9Q784 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
Zc3h13E9Q784 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Zc3h13E9Q784 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Zc3h13E9Q784 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Zc3h13E9Q784 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Zc3h13E9Q784 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC30.9■■■□□ 2.54
Zc3h13E9Q784 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Zc3h13E9Q784 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC30.9■■■□□ 2.54
Zc3h13E9Q784 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Zc3h13E9Q784 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Zc3h13E9Q784 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Zc3h13E9Q784 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Zc3h13E9Q784 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Zc3h13E9Q784 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC30.88■■■□□ 2.53
Zc3h13E9Q784 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Zc3h13E9Q784 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC30.87■■■□□ 2.53
Zc3h13E9Q784 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
Zc3h13E9Q784 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Zc3h13E9Q784 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC30.87■■■□□ 2.53
Zc3h13E9Q784 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Zc3h13E9Q784 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Zc3h13E9Q784 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Zc3h13E9Q784 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC30.86■■■□□ 2.53
Zc3h13E9Q784 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
Zc3h13E9Q784 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC30.86■■■□□ 2.53
Zc3h13E9Q784 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Zc3h13E9Q784 AC117245.4-201ENSMUST00000217388 1646 ntBASIC30.85■■■□□ 2.53
Zc3h13E9Q784 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Zc3h13E9Q784 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Zc3h13E9Q784 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC30.84■■■□□ 2.53
Zc3h13E9Q784 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms