Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptbn4E9PX29 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptbn4E9PX29 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.3■□□□□ 0.84
Sptbn4E9PX29 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.3■□□□□ 0.84
Sptbn4E9PX29 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sptbn4E9PX29 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptbn4E9PX29 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sptbn4E9PX29 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptbn4E9PX29 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Sptbn4E9PX29 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.29■□□□□ 0.84
Sptbn4E9PX29 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.28■□□□□ 0.84
Sptbn4E9PX29 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.28■□□□□ 0.84
Sptbn4E9PX29 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptbn4E9PX29 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptbn4E9PX29 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn4E9PX29 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sptbn4E9PX29 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sptbn4E9PX29 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Sptbn4E9PX29 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn4E9PX29 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn4E9PX29 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Gm7291-201ENSMUST00000199147 382 ntBASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn4E9PX29 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sptbn4E9PX29 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sptbn4E9PX29 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.23■□□□□ 0.83
Sptbn4E9PX29 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sptbn4E9PX29 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sptbn4E9PX29 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.22■□□□□ 0.83
Sptbn4E9PX29 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sptbn4E9PX29 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptbn4E9PX29 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn4E9PX29 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn4E9PX29 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.21■□□□□ 0.83
Sptbn4E9PX29 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn4E9PX29 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn4E9PX29 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Gm26571-201ENSMUST00000181399 666 ntBASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn4E9PX29 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sptbn4E9PX29 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.19■□□□□ 0.82
Sptbn4E9PX29 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptbn4E9PX29 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sptbn4E9PX29 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptbn4E9PX29 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptbn4E9PX29 Gm10399-202ENSMUST00000202768 748 ntBASIC20.18■□□□□ 0.82
Sptbn4E9PX29 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sptbn4E9PX29 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sptbn4E9PX29 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn4E9PX29 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Gm27405-201ENSMUST00000184201 112 ntBASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.16■□□□□ 0.82
Sptbn4E9PX29 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptbn4E9PX29 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Sptbn4E9PX29 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Sptbn4E9PX29 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.15■□□□□ 0.82
Sptbn4E9PX29 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptbn4E9PX29 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Sptbn4E9PX29 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.81
Sptbn4E9PX29 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sptbn4E9PX29 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
Sptbn4E9PX29 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms